Publications
Publications on Google Scholar
Chen, Yihao, Mandic, M., Slaughter, C.G., Tanaka, M., Kikkawa, J.M., Collings, P.J., Yodh, A.G., Morphology and line tension of twist disclinations in a nematic liquid crystal, Soft Matter, Advance Article online, (2024). DOI: 10.1039/D4SM01076K [pdf]
Matlis, G.C., Zhang, Q., Benson, E.J., Weeks, M.K., Andersen, K., Jahnavi, J., Lafontant, A., Breimann, J., Hallowell, T., Lin, Y., Licht, D.J., Yodh, A.G., Kilbaugh, T.J., Forti, R.M., White, B.R., Baker, W.B., Xiao, R., Ko, T.S., Tiffany S. Ko, Chassis-based fiber-coupled optical probe design for reproducible quantitative diffuse optical spectroscopy measurements. PLOS ONE 19(7): e0305254 (2024). PMID: 39052686 PMCID: PMC11271963. doi.org/10.1371/journal.pone.
Baker, W.B., Forti, R.M., Heye, P., Heye, K., Lynch, J.M., Yodh, A.G., Licht, D.J., White, B.R., Hwang, M., Ko, T.S., Kilbaugh, T.J., Modified Beer-Lambert algorithm to measure pulsatile blood flow, critical closing pressure, and intracranial hypertension, Biomed. Opt. Express 15, 5511-5532 (2024). doi.org/10.1364/BOE.529150 [pdf]
Favilla, C. G., Carter, S., Hartl, B., Gitlevich, R., Mullen, M.T., Yodh, A.G., Baker, W. B., and Konecky, S., Validation of the Openwater wearable optical system: cerebral hemodynamic monitoring during a breath-hold maneuver. Neurophotonics 11, 015008 (2024). https://doi.org/10.1117/1.NPh.11.1.015008. [pdf]
Favilla, C. G., Baird GL, Grama K., Konecky, S., Carter, S., Smith, W., Gitlevich, R., Lebron-Cruz, A., Yodh, A. G., McTaggart, R. A., Portable cerebral blood flow monitor to detect large vessel occlusion in patients with suspected stroke, Journal of NeuroInterventional Surgery Published Online First: 21 March 2024. https://doi.org/10.1101/2023.12.14.23299992. [pdf]
Pogue, B. W, Zhu, T. C, Ntziachristos, V., Wilson, B. C., ; Paulsen, K. D., Gioux, S., Nordstrom, R., Pfefer, J. T., Tromberg, B. J., Wabnitz, H., Yodh, A., Chen, Y., Litorja, M., AAPM Task Group Report 311: Guidance for performance evaluation of fluorescence‐guided surgery systems, Medical Physics Vol.51(2), p.740-771 (2024). ISSN: 0094-2405, 2473-4209; https://doi.org/10.1002/mp.16849. [pdf]
Skuli, N., Majmundar, A. J., Krock, B. L., Mesquita, R. C., Mathew, L. K., Quinn, Z. L., Runge, A., Liu, L., Kim, M. N., Liang, J., Schenkel, S., Yodh, A. G., Keith, B., Simon, M. C., Endothelial HIF-2α regulates murine pathological angiogenesis and revascularization processes (Corrigendum), Journal of Clinical Investigation 134(8), e180863 (2024); https://doi.org/10.1172/JCI180863. [pdf]
Greenwood, J.C., Morgan, R.W., Abella, B.S., Shofer, F.S., Baker, W.B., Lewis, A., Ko, T.S., Forti, R.M., Yodh, A.G., Kao, S-H, Kilbaugh, T.J., Jang, D.H., Carbon monoxide as a cellular protective agent in a swine model of cardiac arrest protocol, PLOS ONE 19(5), e0302653 (2024); https://doi.org/10.1371/journal.pone.0302653. [pdf]
Favilla, C.G., Forti, R.M., Carter, S., Kofke, W.A., Kasner, S.E., Baker, W.B., Yodh, A.G., Messe, S.R., Cummings, S., Kung, D.K., Burkhardt, J.K., Pukenas, B., Srinivasan, V.M., Hurst, R.W., and Detre, J.A., Microvascular reperfusion during endovascular thereapy: the balance of supply and demand. Journal of Neurointerventional Surgery, 2024;16:1108-1114 (Epub ahead of print: October 28, 2023), PMID: 37898551 PMCID: PMC11055937. doi:10.1136/jnis-2023-020834. [pdf]
Benson, E.J., Aronowitz, D.I., Forti, R.M., Lafontant, A., Ranieri, N.R., Starr, J.P., Melchior, R.W., Lewis, A., Jahnavi, J., Breimann, J., Yun, B., Laurent. G.H., Lynch, J.M., White, B.R., Gaynor, J.W., Licht, D.J., Yodh, A.G., Kilbaugh, T.J., Mavroudis, C.D., Baker, W.B., and Ko, T.S., Diffuse Optical Monitoring of Cerebral Hemodynamics and Oxygen Metabolism during and after Cardiopulmonary Bypass: Hematocrit Correction and Neurological Vulnerability. Metabolites 13, 1153 (2023). doi.org/10.3390/metabo13111153
Barbhuiya, N.H., Yodh, A.G. and Mishra, C.K. Direction-dependent dynamics of colloidal particle pairs and the Stokes-Einstein relation in quasi-two-dimensional fluids. Nature Communications 14, 5109 (2023). https://doi.org/10.1038/s41467-023-40772-2. [pdf]
Peng, Y., Li, W., Still, T., Yodh, A.G., and Han, Y., In situ observation of coalescence of nuclei in colloidal crystal-crystal transitions. Nature Communications 14, 4905 (2023). https://doi.org/10.1038/s41467-023-40627-w. [pdf]
Ettinger, S., Slaughter, C.G., Parra, S.H., Kikkawa, J.M., Collings, P.J., and Yodh, A.G., Magnetic-field-driven director configuration transitions in radial nematic liquid crystal droplets. Physical Review E 108, 024704 (2023). DOI: 10.1103/PhysRevE.108.024704. [pdf]
Favilla, C.G., Mullen, M.T., Kahn, F., Rasheed, I-Y.D., Messe, S.R., Parthasarathy, A.B., and Yodh, A.G., Dynamic cerebral autoregulation measured by diffuse correlation spectroscopy. Journal of Cerebral Blood Flow & Metabolism, OnlineFirst, January 26, 2023, 1-11, https://doi.org/10.1177/0271678X231153728. [pdf]
Hill, A., Tanaka, M., Aptowicz, K.B., Mishra, C.K., Yodh, A.G., and Ma, X., Depletion-driven antiferromagnetic, paramagnetic, and ferromagnetic behavior in quasi-two-dimensional buckled colloidal solids. Journal of Chemical Physics 158, 194903, (2023). https://doi.org/10.1063/5.0146155. [pdf]
Forti, R.M., Hobson, L.J., Benson, E.J., Ko, T.S, Ranieri, N.R., Laurent, G., Weeks, M.K., Widmann, N.J., Morton, S., Davis, A.M., Sueishi, T., Lin, Y., Wulwick, K.S., Fagan, N., Shin, S.S., Kao, S-H., Licht, D.J., White, B.R., Kilbaugh, T.J., Yodh, A.G., and Baker, W.B., Non-invasive diffuse optical monitoring of cerebral physiology in an adult swine-model of impact traumatic brain injury. Biomedical Optics Express 14, 2432-2448, (2023). https://doi.org/10.1364/BOE.486363. [pdf]
Licht, D.J., Jacobwitz, M., Lynch, J.M., Ko, T., Boorady, T., Devarajan, M., Heye, K.N., Mensah‐Brown, K., Newland, J.J., Schmidt, A., Schwab, P., Winters, M., S.C, Nicolson, Montenegro, L.M., Fuller, S., Mascio, C., Gaynor, J.W., Yodh, A.G., Gebb, J., Vossough, A., Choi, G.H., and Putt, M.E., Impaired Maternal‐Fetal Environment and Risk for Preoperative Focal White Matter Injury in Neonates With Complex Congenital Heart Disease. Journal of the American Heart Association 12, e025516 (2023). PMID: 36974759, PMC10122900, https://doi.org/10.1161/JAHA.
Luckl, J., Baker, W., Boda, K., Emri, M., Yodh, A.G., and Greenberg, J.H., Oxyhemoglobin and Cerebral Blood Flow Transients Detect Infarction in Rat Focal Brain Ischemia. Neuroscience 509, p.132-144 (2023). ISSN: 0306-4522, PMID: 36460221, PMCID: PMC9852213. DOI: 10.1016/j.neuroscience.2022.11.028. [pdf]
Ko, T.S., Mavroudis, C.D., Benson, E.J., Forti, R.M., Melchior, R.W., Boorady, T.W., Morano, V.C., Mensah-Brown, K., Lin, Y., Aronowitz, D., Starr, J.P., Rosenthal, T.M., Shade, B.C., Schiavo, Kellie L; White, Brian R; Lynch, Jennifer M; Gaynor, J.W., Licht, D.J., Yodh, A.G., Baker, W.B., Correlation of Cerebral Microdialysis with Non-Invasive Diffuse Optical Cerebral Hemodynamic Monitoring during Deep Hypothermic Cardiopulmonary Bypass. Metabolites 12 737 (2022). PMID: 36005609, PMCID: PMC9416552. ISSN: 2218-1989, DOI: 10.3390/metabo12080737. [pdf]
Chong, S.H., Ong, Y.H., El Khatib, M., Allu, S.R., Parthasarathy, A.B., Greenberg, J.H., Yodh, A.G., and Vinogradov, S.A., Real-time tracking of brain oxygen gradients and blood flow during functional activation. Neurophotonics. 9, 045006 (2022), doi: 10.1117/1.NPh.9.4.045006. [pdf]
Chong, S.H., Markel, V.A., Parthasarathy, A.B., Ong, Y.H., Abramson, K., Moscatelli, F.A., and Yodh, A.G., Algorithms and instrumentation for rapid spatial frequency domain fluorescence diffuse optical imaging. Journal of Biomedical Optics 27, 116002 (2022). doi: 10.1117/1.JBO.27.11.116002. [pdf]
Lafontant, A., Gabrielli, E.M., Bergonzi, K., Forti, R., Ko, T., Shah, R., Arkles, J., Licht, D., Yodh, A.G., Kofke, W.A., White, B., and Baker, W., Comparison of optical measurements of critical closing pressure acquired before and during induced ventricular arrhythmia in adults. Neurophotonics 9, 035004-1-035004-11 (2022). PMID: 36039170, PMCID: PMC9407009. DOI: 10.1117/1.NPh.9.3.035004. [pdf]
Ayaz, H., Baker, W.B., Blaney, G., Boas, D.A., Bortfeld, H., Brady, K., Brake, J., Brigadoi, S., Buckley, E.M., Carp, S.A., Cooper, R.J., Cowdrick, K.R., Culver, J.R., Dan, I., Dehghani, H., Devor, A., Durduran, T., Eggebrecht, A.T., Emberson, L.L., Fang, Q., Fantini, S., Franceschini, M.A., Fischer, J.B., Gervain, J., Hirsch, J., Hong, K.S., Horstmeyer, R., Kainerstorfer, J.M., Ko, T.S., Licht, D.J., Liebert, A, Luke, R, Lynch, J.M., Mesquida, J., Mesquita, R.C., Naseer, N., Novi,j S.L, Orihuela-Espina, F., O’Sullivan, T.D., Peterka, D.S., Pifferi, A., Pollonini, L, Sassaroli, A., Ricardo Sato, J., Scholkmann, F., Spinelli, L., Srinivasan, V.J., St. Lawrence, K., Tachtsidis, I., Tong, Y., Torricelli, A., Urner, T., Wabnitz, H, Wolf, M., Wolf, U., Xu, S., Yang, C., Yodh, A.G., Yücel, M.A, and Zhou, W., Optical imaging and spectroscopy for the study of the human brain: status report. Neurophotonics, 9, S24001-1-S24001-65 (2022). PMCID: PMC9424749, https://doi.org/10.1117/1.NPh.9.S2.S24001. [pdf]
Wang, L., Cochran, J.M., Ko, T., Baker, W.B., Abramson, K., He, L., Busch, D.R., Kavuri, V., Linn, R.L., Parry, S, Yodh, A.G., and Schwartz, N., Non-invasive monitoring of blood oxygenation in human placentas via concurrent diffuse optical spectroscopy and ultrasound imaging. Nature Biomedical Engineering (2022). https://doi.org/10.1038/
Tanaka, M., Wang, X., Mishra, C.K., Cai, J., Feng, J., Kamien, R.D., and Yodh, A.G., Ratchetlike motion of helical bilayers induced by boundary constraints. Physical Review E 106, L012605 (2022). DOI:https://doi.org/10.1103/
Wei, W.S., Jeong, J., Collings, P.J., and Yodh, A.G., Focal conic flowers, dislocation rings, and undulation textures in smectic liquid crystal Janus droplets. Soft Matter 18, 4360-4271. (2022). DOI: 10.1039/D1SM01623G. [pdf]
White, B.R., Ko, T.S., Morgan, R.W., Baker, W.B., Benson, E.J., Lafontant, A., Starr, J.P., Landis, W.P., Andersen, K., Jahnavi, J., Breimann, J., Delso, N., Morton, S., Roberts, A.L, Lin, Y., Graham, K., Berg, R.A., Yodh, A.G., Licht, D.L., and Kilbaugh, T.J., Low frequency power in cerebral blood flow is a biomarker of neurologic injury in the acute period after cardiac arrest. Resuscitation 178, 12-18 (2022). https://doi.org/10.1016/j.resuscitation.2022.07.004. [pdf]
de la Cotte, A., Stenull, O., Ettinger, S., Collings, P.J., Lubensky, T.C., and Yodh, A.G., Giant director fluctuations in liquid crystal drops. Physical Review E 105, 044702 (2022). https://doi.org/10.1103/PhysRevE.105.044702. [pdf]
Stenull, O., de la Cotte, A., Ettinger, S., Collings, P.J., Yodh, A.G., and Lubensky, T.C., Theory of director fluctuations about a hedgehog defect in a nematic drop. Physical Review E 105, 044703 (2022). https://doi.org/10.1103/PhysRevE.105.044703. [pdf]
Ettinger, S., Dietrich, C.F., Mishra, C.K., Miksch, C., Beller, D.A., Collings, P.J., and Yodh, A.G., Rods in a lyotropic chromonic liquid crystal: emergence of chirality, symmetry-breaking alignment, and caged angular diffusion. Soft Matter, 18, 487-495 (2022). https://doi.org/10.1039/
Galloway, K.L., Teich, E.G., Ma, X.G., Kammer, C.H., Graham, I.R., Keim, N.C., Reina, C., Jerolmack, D.J., Yodh, A.G., and Arratia, P.E., Relationships between structure, memory and flow in sheared disordered materials. Nature Physics 18, 1-7 (2022). https://doi.org/10.1038/
Li, Z., Englund, E.K., Langham, M.C., Feng, J., Jia, K., Floyd, T.F., Yodh, A.G., and Baker, W.B., Exercise training increases resting calf muscle oxygen metabolism in patients with peripheral artery disease. Metabolites 11, 814 (2021). https://doi.org/10.3390/
Rubtsova, N.I., Hart, M.C., Arroyo, A.D., Osharovich, S.A., Liebov B.K., Miller, J., Yuan, M., Cochran, J.M., Chong, S., Yodh, A.G., Busch, T.M., Delikatny, E.J., Anikeeva, N., and Popov, A.V., NIR Fluorescent Imaging and Photodynamic Therapy with a Novel Theranostic Phospholipid Probe for Triple-Negative Breast Cancer Cells. Bioconjugate Chemistry 32, 1852–1863 (2021). https://doi.org/10.1021/acs.
Flanders, T.M., Lang S, Ko, T.S., Andersen, K.N, Jahnavi, J., Flibotte, J.N., Licht, D.L., Tasian, G.E., Sotardi, S.T., Yodh, A.G., Lynch, J.M., Kennedy, B.C., Storm, P.B., White B.R., Heuer, PG., Baker, W.B., Optical detection of intracranial pressure and perfusion changes in neonates with hydrocephalus. Journal of Pediatrics. 236, 54-61 (2021). https://doi.org/10.1016/j.
Lynch, J.M., Mavroudis, C.D., Ko, T.S., Jacobwitz, M., Busch, D.R., Xiao, R., Nicolson, S.C., Montenegro, L.M., Gaynor, J.W., Yodh, A.G., and Licht, D.J., Association of ongoing cerebral oxygen extraction during deep hypothermic circulatory arrest with postoperative brain injury. Seminars in Thoracic and Cardiovascular Surgery. 33, 1-10 (2021). https://doi.org/10.1053/j.
Padawer-Curry, J.A., Volk, L.E., Mavroudis, C.D., Ko, T.S., Morano, V.C., Busch, D.R., Rosenthal, T.M., Melchior, R.W., Shade, B.C., Schiavo, K.L., Boorady, T.W., Schmidt, A.L., Andersen, K.N., Breimann, J.S., Jahnavi, J., Mensah-Brown, K.G., Yodh, A.G., Mascio, C.E., Kilbaugh, T.J., Licht, D.J., White, B.R., and Baker, W.B., Effects of circulatory arrest and cardiopulmonary bypass on cerebral autoregulation in neonatal swine. Pediatric Research 435, 1-9 (2021). https://doi.org/10.1038/s41390-021-01525-3. [pdf]
Ma, X., Mishra, C.K., Habdas, P., and Yodh, A.G., Structural and short-time vibrational properties of colloidal glasses and supercooled liquids in the vicinity of the re-entrant glass transition. Journal of Chemical Physics 155, 074902 (2021). https://doi.org/10.1063/5.0059084. [pdf]
Busch, D.R., Lin, W., Goh, C.C., Gao, F., Larson, N., Wahl, J., Bilfinger, T.V., Yodh, A.G., and Floyd, T.F., Towards rapid intraoperative axial localization of spinal cord ischemia with epidural diffuse correlation monitoring. PLOS ONE 16, e0251271 (2021). https://doi.org/10.1371/
Gregori-Pla, C., Mesquita, R.C., Favilla, C.G., Busch, D.R., Blanco, I., Zirak, P., Kobayashi Frisk, L., Avtzi. S., Maruccia, F., Giacalone, G., Cotta, G., Camps-Renom, P., Mullen, M.T., Martí-Fàbregas, J., Prats-Sánchez, L., Martínez-Domeño, A., Kasner, S.E., Greenberg, J.H., Zhou, C., Edlow, B.L., Putt, M.E., Detre, J.A., Yodh, A.G., Durduran, T., and Delgado-Mederos, R., Blood flow response to orthostatic challenge identifies signatures of the failure of static cerebral autoregulation in patients with cerebrovascular disease. BMC Neurology 21, 154 (2021). https://doi.org/10.1186/s12883-021-02179-8. [pdf]
Cochran, J.M., Leproux, A., Busch, D.R., O’Sullivan, T.D., Yang, W., Mehta, R.S., Police, A.M., Tromberg, B.J., and Yodh, A.G., Breast cancer differential diagnosis using diffuse optical spectroscopic imaging and regression with z-score normalized data. Journal of Biomedical Optics 26, 026004 (2021). https://doi.org/10.1117/1.JBO.26.2.026004. [pdf]
Ko, T.S., Mavroudis, C.D., Morgan, R.W., Baker, W.B., Marquez, A.M., Boorady, T.W., Devarajan, M., Lin, Y., Roberts, A.L., Landis, W.p., Mensah-Brown, K., Nadkarni, V.M., Berg, R.A, Sutton, R.M., Yodh, A.G., Licht, D.J., Guo, W., and Kilbaugh, T.J., Non-invasive diffuse optical neuromonitoring during cardiopulmonary resuscitation predicts return of spontaneous circulation. Science Reports 11, 3828 (2021). https://doi.org/10.1038/s41598-021-83270-5. [pdf]
Padawer-Curry, J.A., Jahnavi, J., Breimann, J.S., Licht, D.L., Yodh, A.G., Cohen, A.S., and White, B.R., Variability in atlas registration of optical intrinsic signal imaging and its effect on functional connectivity analysis. J. Opt. Soc. Am. A 38, 245-252 (2021). https://doi.org/10.1364/JOSAA.410447. [pdf]
White, B.R., Padawer-Curry, J.A., Ko, T., Baker, W., Breimann, J., Cohen, A.S., Licht, D.J., and Yodh, A.G., Wavelength censoring for spectroscopy in optical functional neuroimaging. Physics in Medicine & Biology. Accepted Manuscript, December 16, 2020. https://doi.org/10.1088/1361-
Fisher, J.A.N., Gumenchuk, I., Rogovin, O.S., Yodh, A.G., and Busch, D.R., Asymmetric, dynamic adaptation in prefrontal cortex during dichotic listening tasks. Neurophotonics 7, 045008 (2020). https://doi.org/10.1117/1.NPh.7.4.045008. [pdf]
Ong, Y.H., Dimofte, A., Kim, M.M., Finlay, J.C., Sheng, T.Q., Singhal, S., Cengel, K.A., Yodh, A.G., Busch, T.M., and Zhu, T.C., Reactive Oxygen Species Explicit Dosimetry for Photofrin-mediated Pleural Photodynamic Therapy. Photochemistry and Photobiology 20, 340-348 (2020). DOI: 10.1111/php.13176. DOI: 10.1111/php.13176. [pdf]
Li, W., Peng, Y., Zhang, Y., Still, T., Yodh, A.G., and Han, Y., Shear-assisted grain coarsening in colloidal polycrystals. Proceedings of the National Academy of Sciences 117 24055-24060 (2020). DOI: https://doi.org/10.1073/
Proceedings of the National Academy of Sciences 117. https://doi.org/10.1073/pnas.2000698117. [pdf]
Busch, D.R., Lin, W., Cai, C., Cutrone, A., Tatka, J., Kovarovic, B.J., Yodh, A.G., Floyd, T.F., Barsi, J., Multi-site optical monitoring of spinal cord ischemia during spine distraction. Journal of Neurotrauma. Published Online:27 May 2020. DOI: 10.1089/neu.2020.7012. [pdf]
Ong, Y.H., Miller, J., Yuan, M., Chandra, M., El Khatib, Vinogradov, S.A., Putt, M.E., Zhu, T.C., Cengel, K.A., Yodh, A.G., and Busch, T.M., Blood flow measurements enable optimization of light delivery for personalized photodynamic therapy. Cancers 12, (2020). DOI: 10.3390/cancers12061584. [pdf]
Xu, Y., Ge, D., Calderon-Ortiz, G. A., Exarhos, A. L., Bretz, C., Alsayed, A., Kurz, D., Kikkawa, J. M., Dreyfus, R., Yang, S., Yodh, A. G. Highly conductive and transparent coatings from flow-aligned silver nanowires with large electrical and optical anisotropy. Nanoscale 12, 6438–6448 (2020). https://doi.org/10.1039/c9nr09598e. [pdf]
Busch, D.R., Baker, W.B., Mavroudis, C.D., Ko, T., Lynch, J.M., McCarthy, A.L., DuPont-Thibodeau, G., Buckley, E.M., Jacobwitz, M., Boorady, T.W., Mensah-Brown, K., Connelly, J.T., Yodh, A.G., Kilbaugh, T.J., and Licht, D.J., Noninvasive optical measurement of microvascular cerebral hemodynamics and autoregulation in the neonatal ECMO patient. Pediatric Research, 13 (2020). DOI: 10.1038/s41390-020-0841-6 PMID: 32172282. [pdf]
Novi, S.L., Roberts, E., Spagnuolo, D., Spilsbury, B.M., Price, D.C., Imbalzano, C.A., Forero, E., Yodh, A.G., Tellis, G.M., Tellis, C.M., and Mesquita, R.C., Functional near-infrared spectroscopy for speech protocols: characterization of motion artifacts and guidelines for improving data analysis. Neurophotonics 7, 015001 (2020). DOI: 10.1117/1.NPh.7.1.015001. [pdf]
Ko, T.S., Mavroudis, C.D., Baker, W.B., Morano, V.C., Mensah-Brown, K., Boorady, T.W., Schmidt, A.L., Lynch, J.M., Busch, D.R., Gentile, J., Bratinov, G., Lin, Y.X., Jeong, S., Melchior, R.W., Rosenthal, T.M., Shade, B.C., Schiavo, K.L., Xiao, R., Gaynor, J.W., Yodh, A.G., Kilbaugh, T.J., and Licht, D.J., Non-invasive optical neuromonitoring of the temperature-dependence of cerebral oxygen metabolism during deep hypothermic cardiopulmonary bypass in neonatal swine. Journal of Cerebral Blood Flow and Metabolism 40, 187-203 (2020). PMID: 30375917, PMCID: PMC6928559. DOI: 10.1177/0271678X18809828. [pdf]
White, B.R., Padawer-Curry, J.A., Cohen, A.S., Licht, D.J., and Yodh, A.G., Brain segmentation, spatial censoring, and averaging techniques for optical functional connectivity imaging in mice. Biomedical Optics Express 10, 5952-5973 (2019). DOI: 10.1364/BOE.10.005952. [pdf]
Wei, W. S., Xia, Y., Ettinger, S., Yang, S. and Yodh, A. G. Molecular heterogeneity drives reconfigurable nematic liquid crystal drops. Nature 576, 433-436 (2019). DOI:10.1038/s41586-019-1809-8. [pdf]
Mullen, M.T., Parthasarathy, A.B., Zandieh, A., Baker, W.B., Mesquita, R.C., Loomis, C., Torres, J., Guo, W., Favilla, C.G., Messé, S.R., Yodh, A.G., Detre, J.A., and Kasner, S.E., Cerebral blood flow response during bolus normal saline infusion after ischemic stroke. Journal of Stroke and Cerebrovascular Diseases 28, 104294. (2019). PMID: 31416759 DOI:10.1016/j.jstrokecerebrovasdis.2019.07.010 [pdf]
Favilla, C.G., Forti, R.M., Zamzam, A., Detre, J.A., Mullen, M.T., Yodh, A.G., Kasner, S.E., Busch, D.R., Baker, W.B., Mesquita, R.C., Kung, D., and Messé, S.R., Perfusion Enhancement with Respiratory Impedance AfterStroke (PERI-Stroke), Neurotherapeutics (2019). PMID: 31140115 DOI:10.1007/s13311-019-00744-1 [pdf]
Mishra, C.K., Ma, X., Habdas, P., Aptowicz, K.B., and Yodh, A.G., Correlations between short- and long-time relaxation in colloidal supercooled liquids and glasses. Physical Review E 100, 020603(R) (2019). DOI:10.1103/PhysRevE.100.020603 [pdf]
Milej, D., He, L., Abdalmalak, A, Baker, W.B., Anazodo, U.C., Diop, M., Dolui, S., Kavuri, V.C., Pavlosky, W., Wang, L., Balu, R., Detre, J.A., Amendolia, O., Quattrone, F., Kofke, W.A., Yodh, A.G., and St. Lawrence, K., Quantification of cerebral blood flow in adults by contrast-enhanced near-infrared spectroscopy: validation against MRI. Journal of Cerebral Blood Flow & Metabolism 0, 1-13 (2019). doi.org/10.1177/0271678X19872564. [pdf]
Baker, W.B., Balu, R., He, L, Kavuri, V.C., Busch, D.R., Amendolia, O., Quattrone, F., Frangos, S., Maloney-Wilensky, E., Abramson, K., Mahanna Gabrielli E,. Yodh, A.G., and Kofke, W.A., Continuous non-invasive optical monitoring of cerebral blood flow and oxidative metabolism after acute brain injury. Journal of Cerebral Blood Flow & Metabolism 39, 1469-1485 (2019). https://doi.org/10.1177/0271678X19846657. [pdf]
Mishra, C.K., Habdas, P. and Yodh, A.G., Dynamic heterogeneities in colloidal supercooled liquids: experimental tests of inhomogeneous mode coupling theory. Journal of Physical Chemistry B 123, 5181-5188 (2019). http://dx.doi.org/10.1021/acs.jpcb.9b03419. [pdf]
Li, L.Z., Xu, H.N., and Yodh, A.G., Commemorating Britton Chance. Molecular Imaging and Biology 21, 399-400 (2019). https://doi.org/10.1007/s11307-019-01359-w. [pdf]
Forti, R.M., Favilla, C.G., Cochran, J.M., Baker, W.B., Detre, Kasner, S.E., Mullen, M.T., Messé, S.R., Kofke, A., Balu, R., Kung, D., Pukenas, B.A, Sedora-Roman, N.I., Hurst, R.W., Choudhri, O.A., Mesquita, R.C., and Yodh, A.G., Transcranial optical monitoring of cerebral hemodynamics in acute stroke patients during mechanical thrombectomy. Journal of Stroke and Cerebrovascular Diseases 28, 1483-1495 (2019). DOI: 10.1016/j.jstrokecerebrovasdis.2019.03.019. [pdf]
Ma, X., Liu, J., Zhang, Y., Habdas, P., and Yodh, A.G., Excess entropy and long-time diffusion in colloidal fluids with short-range interparticle attraction. Journal of Chemical Physics 150, 144907 (2019). (Editor’s Choice) https://doi.org/10.1063/1.5091564. [pdf]
Kikkawa, J.M., Mele, E., Pinczuk, A, Tosatti, E. and Yodh, A.G., National Academy of Sciences Biographical Memoir of Elias Burstein (1917-2017). Washington DC: National Academy of Sciences. [pdf]
Busch, D.R., Balu, R., Baker, W.B., Guo, W., He, L., Diop, M., Milej, D., Kavuri, V., Amendolia, O., St. Lawrence, K., Yodh, A.G., and Kofke, W.A., Detection of Brain Hypoxia Based on Noninvasive Optical Monitoring of Cerebral Blood Flow with Diffuse Correlation Spectroscopy. Neurocritical Care 30, 72-80 (2019). doi.org/10.1007/s12028-018-0573-1. [pdf]
Cochran, J.M., Busch, D.R., Lin, L., Minkoff, D.L., Schweiger, M., Arridge, S., and Yodh, A.G., Hybrid time-domain and continuous-wave diffuse optical tomography instrument with concurrent, clinical magnetic resonance imaging for breast cancer imaging. Journal of Biomedical Optics 24, 051409 (2019). https://doi.org/10.1117/1.JBO.24.5.051409. [pdf]
Ma, X., Davidson, Z.S., Still, T., Ivancic, R.J.S., Schoenholz, S.S., Liu, A.J., and Yodh, A.G., Heterogeneous activation, local structure, and softness in supercooled colloidal liquids. Physical Review Letters 122, 028001 (2019). (Editor’s Choice) https://doi.org/10.1103/PhysRevLett.122.028001. [pdf]
He, L., Baker, W.B., Milej, D., Kavuri, V.C., Mesquita, R.C., Busch, D.R., Abramson, K., Jiang, J.Y., Diop, M., St. Lawrence, K., Amendolia, O., Quattrone, F., Balu, R., Kofke, W.A., and Yodh, A.G., Noninvasive continuous optical monitoring of absolute cerebral blood flow in critically ill adults. Neurophotonics 5, 045006 (2018), doi: 10.1117/1.NPh.5.4.045006. [pdf]
TS Ko, CD Mavroudis, WB Baker, VC Morano, K Mensah-Brown, TW Boorady, AL Schmidt5, JM Lynch6, DR Busch, J Gentile, G Bratinov, Y Lin, S Jeong, RW Melchior, TM Rosenthal, BC Shade, KL Schiavo, R Xiao, JW Gaynor, AG Yodh, TJ Kilbaugh, DJ Licht, Non-invasive optical neuromonitoring of the temperature-dependence of cerebral oxygen metabolism during deep hypothermic cardiopulmonary bypass in neonatal swine , Journal of Cerebral Blood Flow & Metabolism (2018) doi.org/10.1177/0271678X18809828. [pdf]
Cochran, J.M., Busch, D.R., Leproux, A., Zhang, Z., O’Sullivan, T.D., Cerussi, A.E., Carpenter, P.M. Mehta, R.S, Roblyer, D., Yang, W., Paulsen, K.D., Pogue, B., Jiang, S., Kaufman, P.A., Chung, S.H., Schnall, M., Snyder, B.S., Hylton, N., Carp, S.A., Isakoff, S.J., Mankoff, D., Tromberg, B.J., and Yodh, A.G., Tissue oxygen saturation predicts response to breast cancer neoadjuvant chemotherapy within 10 days of treatment. Journal of Biomedical Optics 24, 021202 (2018). [pdf]
Martinez, A., Collings, P.J., and Yodh, A.G., Brownian Dynamics of Particles “Dressed” by Chiral Director Configurations in Lyotropic Chromonic Liquid Crystals. Physical Review Letters 121, 177801-1–177801-6 (2018). doi.org/10.1103/PhysRevLett.121.177801. [pdf]
Lynch, J.M., Ko, T., Busch, D.R., Newland, J.J., Winters, M.E., Mensah-Brown, K., Boorady, T.W., Xiao, R., Nicolson, S.C., Montenegro, L.M., Gaynor, J.W., Spray, T.L., Yodh, A.G., Naim, M.Y., Licht, D.L., Preoperative cerebral hemodynamics from birth to surgery in neonates with critical congenital heart disease. Journal of Thoracic and Cardiovascular Surgery 156, 1657-1664 (2018). https://doi.org/10.1016/j.jtcvs.2018.04.098. [pdf]
Busch, D.R., Davis, J., Kogler, A., Galler, R.M., Parthasarathy, A.B., Yodh, A.G., and Floyd, T.F., Laser safety in fiber-optic monitoring of spinal cord hemodynamics: a preclinical evaluation. Journal of Biomedical Optics 23, 065003 (2018). https://doi.org/10.1117/1.JBO.23.6.065003. [pdf]
Pogue, B.W., Zhu, T.C., Ntziachristos, V., Paulsen, K.D., Wilson, B.C., Pfefer, J., Nordstrom, R.J., Litorja, M., Wabnitz, H., Chen, Y., Gioux, S., Tromberg, B.J., and Yodh, A.G., Fluorescence-guided surgery and intervention – An AAPM emerging technology blue paper. Medical Physics 45, 2681-2688 (2018). https://doi.org/10.1002/mp.12909. [pdf]
Yodh, A.G., Biophysical optics in a single voice. Physics Today 71, 56 (2018); https://doi.org/10.1063/PT.3.3848. [pdf]
Dias, C.S., Yunker, P.J., Yodh, A.G., Araújo, N.A.M., and Telo da Gama, M.M., Interaction anisotropy and the KPZ to KPZQ transition in particle deposition at the edges of drying drops. Soft Matter 14, 1903-1907 (2018). https://doi.org/10.1039/C7SM02136D. [pdf]
Parthasarathy, A.B, Gannon, K.P., Baker, W.B., Favilla, C.G., Balu, R., Kasner, S.E., Yodh, A.G, Detre, J.A., and Mullen, M.T., Dynamic autoregulation of cerebral blood flow measured non-invasively with fast diffuse correlation spectroscopy. Journal of Cerebral Blood Flow & Metabolism 38, 230-240 (2018). https://doi.org/10.1177/0271678X17747833. [pdf]
Leproux, A., O’Sullivan, T.D., Cerussi, A., Durkin, A., Hill, B., Hylton, N., Yodh, A.G., Carp, S.A., Boas, D., Jiang, S.D., Paulsen, K.D., Pogue, B., Roblyer, D., Yang, W., and Tromberg, B.J., Performance assessment of diffuse optical spectroscopic imaging instruments in a 2-year multicenter breast cancer. Journal of Biomedical Optics 22, 121604 (2017). https://doi.org/10.1117/1.JBO.22.12.121604. [pdf]
Baker, W.B., Li, Z., Schenkel, S.S., Chandra, M., Busch, D.R., Englund, E.K., Schmitz, K.H., Yodh, A.G., Floyd, T.F. and Mohler III, E.R., Effects of Exercise Training on Calf Muscle Oxygen Extraction and Blood Flow in Patients with Peripheral Artery Disease. Journal of Applied Physiology 123, 1599-1609 (2017). https://doi.org/10.1152/japplphysiol.00585. [pdf]
Yazdi, H.S., O’Sullivan, T.D., Leproux, A., Hill, B., Durkin, A., Telep, S., Lam, J., Yazdi, S.S., Police, A.M., Carroll, R.M., Combs, F.J., Stromberg, T., Yodh, A.G., and Tromberg, B.J., Mapping breast cancer blood flow index, composition, and metabolism in a human subject using combined diffuse optical spectroscopic imaging and diffuse correlation spectroscopy. Journal of Biomedical Optics 22, 045003 (2017). https://doi.org/10.1117/1.JBO.22.4.045003. [pdf]
Cubuk, E.D., Ivancic, R.J.S., Schoenholz, S.S., Strickland, D.J., Basu, A., Davidson, Z.S., Fontaine, J., Hor, J.L., Huang, Y.-R., Jiang, Y., Keim, N.C., Koshigan, K.D., Lefever, J.A., Liu, T., Ma, X.-G., Magagnosc, D.J., Morrow, E., Ortiz, C.P., Rieser, J.M., Shavit, A., Still, T., Xu, Y., Zhang, Y., Nordstrom, K.N., Arratia, P.E., Carpick, R.W., Durian, D.J., Fakhraai, Z., Jerolmack, D.J., Lee, D., Li, J., Riggleman, R., Turner, K.T., Yodh, A.G., Gianola, D.S., and, Liu, A.J., Structure-property relationships from universal signatures of plasticity in disordered solids. Science 358, 1033-1037 (2017). https://doi.org/10.1126/science.aai8830. [pdf]
Baker, W.B., Parthasarathy, A.B., Gannon, K.P., Kavuri, V.C., Busch, D.R., Abramson, K., He, L., Mesquita, R.C., Mullen, M.T., Detre, J.A., Greenberg, J.H., Licht, D.L., Balu, R., Kofke, W.A., and Yodh, A.G, Noninvasive optical monitoring of critical closing pressure and arteriole compliance in human subjects. Journal of Cerebral Blood Flow & Metabolism 37, 2691-2705 (2017). https://doi.org/10.1177/0271678X17709166. [pdf]
Davidson, Z.S., Huang, Y., Gross, A., Martinez, A., Still, T., Zhou, C., Collings, P.J., Kamien, R.D., and Yodh, A.G., Deposition and drying dynamics of liquid crystal droplets. Nature Communications 8, Article number: 15642 (2017). https://doi.org/10.1038/ncomms15642. [pdf]
Cochran, J.M., Chung, S.H., Leproux, A., Baker, W.B., Busch, D.R., DeMichele, A.M., Tchou, T., Tromberg, B.J., and Yodh, A.G., Longitudinal optical monitoring of blood flow in breast tumors during neoadjuvant chemotherapy. Physics in Medicine and Biology, Volume 62 4637-4653 (2017). https://doi.org/1088/1361-6560/aa6cef. [pdf]
Peng, Y., Li, W., Wang, F., Still, T., Yodh, A.G., and Han, Y., Diffusive and martensitic nucleation kinetics in solid-solid transitions of colloidal crystals. Nature Communications 8, Article number: 14978 (2017). https://doi.org/10.1038/ncomms14978. [pdf]
Jeong, J., Cho, Y., Lee, S.Y., Gong, X., Kamien, R.D., Yang, S., and Yodh, A.G., Topography-guided buckling of swollen polymer bilayer films into three-dimensional structures. Soft Matter 13, 956-962 (2017). https://doi.org/10.1039/C6SM02299E. [pdf]
Favilla, C.G., Parthasarathy, A.B., Detre, J.A., Yodh, A.G., Mullen, M.T., Kasner, S.E., Gannon, K., and Messe, S.R., Non-invasive respiratory impedance enhances cerebral perfusion in healthy adults. Frontiers in Neurology 8, Article 45 (2017). https://doi.org/10.3389/fneur.2017.00045. [pdf]
Tromberg, B.J., Zhang, Z., Leproux, A., O’Sullivan, T.D., Cerussi, A.E., Carpenter, P.M., Mehta, R.S., Roblyer, D., Yang, W., Paulsen, K.D., Jiang, S.D., Kaufman, P.A., Yodh, A.G., Chung, S.H., Schnall, M., Snyder, B.S., Hylton, N., Boas, D.A., Carp, S.A., Isakoff, S.J., Mankoff, D., Predicting responses to neoadjuvant chemotherapy in breast cancer: ACRIN 6691 trial of diffuse optical spectroscopic imaging. Cancer Research 76, 5933-5944 (2016). https://doi.org/10.1158/0008-5472.CAN-16-0346. [pdf]
Brown, Z., Iwanicki, M.J., Gratale, M.D., Ma, X., Yodh, A.G., and Habdas, P., Correlated rearrangements of disordered colloidal suspensions in the vicinity of the reentrant glass transition. Europhysics Letters 115, 68003 (2016). https://doi.org/10.1209/0295-5075/115/68003. [pdf]
Gratale, M.D., Ma, X., Davidson, Z.S., Still, T., Habdas, P., and Yodh, A.G., Vibrational properties of quasi-two-dimensional colloidal glasses with varying interparticle attraction. Physical Review E 94, 042606 (2016). 10.1103/PhysRevE.94.042606 [pdf]
Ban, H.Y., Schweiger, M., Kavuri, V.C., Cochran, J.M., Xie, L., Busch, D.R., Katrasnik, J., Pathak, S., Chung, S.H., Lee, K., Choe, R., Czerniecki, B.J., Arridge, S.R., and Yodh, A.G., Heterodyne frequency-domain multispectral diffuse optical tomography of breast cancer in the parallel-plane transmission geometry. Medical Physics 43, 4383-4395 (2016). https://doi.org/10.1118/1.4953830. [pdf]
Busch, D.R., Rusin, C.G., Miller-Hance, W., Kibler, K., Baker, W.B., Heinle, J.S., Fraser, C.D., Yodh, A.G., Licht, D.J., and Brady, K.M., Continuous cerebral hemodynamic measurement during deep hypothermic circulatory arrest. Biomedical Optics Express 7, 3461-3470 (2016). https://doi.org/10.1364/BOE.7.003461. [pdf]
Wang, H., Li, B., Yodh, A.G., and Zhang, Z., Stimuli-responsive shape switching of polymer colloids by temperature-sensitive absorption of solvent. Angewandte Chemie International Edition 55, 1-5 (2016). https://doi.org/10.1002/anie.201604294. [pdf]
Gratale, M.D., Still, T., Matyas, C., Davidson, Z.S., Lobel, S., Collings, P.J., and Yodh, A.G., Tunable depletion potentials driven by shape variation of surfactant micelles. Physical Review E 93, 050601(R) (2016). 10.1103/PhysRevE.93.050601. [pdf]
Wei, W-S., Gharbi, M.A., Lohr, M.A., Still, T., Gratale, M.D., Lubensky, T.C., Stebe, K.J., and Yodh, A.G., Dynamics of ordered colloidal particle monolayers at nematic liquid crystal interfaces. Soft Matter 12, 4715-4724 (2016). https://doi.org/10.1039/C6SM00295A. [pdf]
Wang, D., Parthasarathy, A.B., Baker, W.B., Gannon, K., Kavuri, V., Ko, T., Schenkel, S., Li, Z., Li, Z., Mullen, M.T., Detre, J.A., and Yodh, A.G., Fast blood flow monitoring in deep tissues with real-time software correlators. Biomedical Optics Express 7, 776-797 (2016). https://doi.org/10.1364/BOE.7.000776. [pdf]
Busch, D.R., Lynch, J.M., Winters, M.E., McCarthy, A.L., Newland, J.J., Ko, T., Cornaglia, M.A., Radcliffe, J., McDonough, J.M., Samuel, J. Matthews, E., Xiao, R., Yodh, A.G., Marcus, C.L., Licht, D.J., and Tapia, I.E., Cerebral blood flow response to hypercapnia in children with obstructive sleep apnea syndrome. Sleep 39, 209-216 (2016) https://doi.org/10.5665/sleep.5350. [pdf]
Li, Z., Baker, W.B., Parthasarathy, A.B., Ko, T.S., Wang, D., Schenkel, S., Durduran, T., Li, G., and Yodh, A.G., Calibration of diffuse correlation spectroscopy blood flow index with venous-occlusion diffuse optical spectroscopy in skeletal muscle, Journal of Biomedical Optics 20 125005 (2015). https://doi.org/10.1117/1.JBO.20.12.125005 [pdf]
Kogler, A.S., Bilfinger, T.V., Galler, R.M., Mesquita, R.C., Cutrone, M., Schenkel, S.S., Yodh, A.G., and Floyd, T.F., Fiber-optic monitoring of spinal cord hemodynamics in experimental aortic occlusion. Anesthesiology (2015). https://doi.org/10.1097/ALN.0000000000000883 [pdf]
Edwards, C., Arbabi, A., Bhaduri, B., Wang X., Ganti, R., Yunker, P.J., Yodh, A.G., Popescu, G., and Goddard, L.L., Measuring the nonuniform evaporation dynamics of sprayed sessile microdroplets with quantitative phase imaging. Langmuir 31, 11020-11032 (2015). https://doi.org/10.1021/acs.langmuir.5b02148 [pdf]
Sussman, D.M., Schoenholz, S.S., Xu, Y., Still, T., Yodh, A.G., and Liu, A.J., Strain fluctuations and elastic moduli in disordered solids. Physical Review E 92, 022307 (2015) https://doi.org/10.1103/PhysRevE.92.022307 [pdf]
Majmundar, Amar J., Lee, David S. M., Skuli, Nicolas, Mesquita, Rickson C., Kim, Meeri N., Yodh, Arjun G., Nguyen-McCarty, Michelle, Li, Bo, Simon and M. Celeste, HIF modulation of Wnt signaling regulates skeletal myogenesis in vivo, Development, 142, Pages: 2405-2412 (2015). https://doi.org/10.1242/dev.123026 [pdf]
Still, T., Yunker, P.J., Hanson, K., Davidson, Z.S., Lohr, M.A., Aptowicz, K.B., and Yodh, A.G., Hydrogels: Temperature-sensitive hydrogel-particle films from evaporating drops. Advanced Materials Interfaces 16, (2015). https://doi.org/10.1002/admi.201570078 [pdf]
Baker, W.B., Parthasarathy, A.B., Ko, T.S., Busch, D.R., Abramson, K., Tzeng, S., Mesquita, R.C., Durduran, T., Greenberg, J.H., Kung, D.K., Yodh, A.G., Pressure modulation algorithm to separate cerebral hemodynamic signals from extracerebral artifacts, Neurophotonics 2, 035004, https://doi.org/10.1117/1.NPh.2.3.035004 (2015). [pdf]
Jeong, J., Gross, A., Wei, W-S., Tu, F., Lee, D., Collings, P.J., and Yodh, A.G., Liquid crystal Janus emulsion droplets: preparation, tumbling, and swimming. Soft Matter, 11, 6747-6754 https://doi.org/10.1039/C5SM01053E (2015). [pdf]
Holt, D., Parthasarathy, A.B., Okusanya, O., Keating, J., Venegas, O., Deshpande, C., Karakousis, G., Madajewski, B., Durham, A., Nie, S., Yodh, A.G., and Singhal, S., Intraoperative near-infrared fluorescence imaging and spectroscopy identifies residual tumor cells in wounds. Journal of Biomedical Optics 20, 076002 https://doi.org/10.1117/1.JBO.20.7.076002 (2015). [pdf]
Chung, S.H., Feldman, M.D., Martinez, D., Kim, H., Putt, M.E., Busch, D.R., Tchou, J., Czerniecki, B.J., Schnall, M.D., Rosen, M.A., DeMichele, A., Yodh, A.G., and Choe, R., Macroscopic optical physiological parameters correlate with microscopic proliferation and vessel area breast cancer signatures. Breast Cancer Research 17 1-14 https://doi.org/10.1186/s13058-015-0578-z (2015). [pdf]
Davidson, Z.S., Kang, L., Jeong, J., Still, T., Collings, P.J., Lubensky, T.C., and Yodh, A.G., Chiral structures and defects of lyotropic chromonic liquid crystals induced by saddle-splay elasticity. Physical Review E (Rapid Communications) 91, 050501(R) DOI: 10.1103/PhysRevE.91.050501 (2015). [pdf]
Sanborn, M.R., Edsell, M.E., Kim, M.N., Mesquita, R., Putt, M.E., Imray, C, Yow, H., Wilson, M.H., Yodh, A.G., Grocott, M., and Martin, D.S., Cerebral hemodynamics at altitude: effects of hyperventilation and acclimatization on cerebral blood flow and oxygenation. Wilderness & Environmental Medicine, 26, 133-141 (2015). https://doi.org/10.1016/j.wem.2014.10.001. [pdf]
Jeong, J., Kang, L, Davidson, Z.S., Collings, P.J., Lubensky, T.C., and Yodh, A.G., Chiral structures from achiral liquid crystals in cylindrical capillaries. PNAS, 112, E1837-E1844 (2015). https://doi.org/10.1073/pnas.1423220112 [pdf]
Peng, Y., Wang, F., Wang, Z., Alsayed, A.M., Zhang, Z., Yodh, A.G., and Han, Y., Two-step nucleation mechanism in solid–solid phase transitions. Nature Materials 14, 101-108, https://doi.org/10.1038/nmat4083 (Online 9/2014; In-print 1/2015). [pdf]
Rieser, J.M., Arratia, P.E., Yodh, A.G., Gollub, J.P. and Durian, D.J., Tunable capillary-induced attraction between vertical cylinders. Langmuir, 31, 2421-2429 (2015). https://doi.org/10.1021/la5046139 [pdf]
Dreyfus, R., Xu, Y., Still, T., Hough, L.A., Yodh, A.G., and Torquato, S., Diagnosing hyperuniformity in two-dimensional, disordered, jammed packings of soft spheres. Physical Review E 91, 012302 https://doi.org/10.1103/PhysRevE.91.012302 (2015). [pdf]
Buckley, E.M., Parthasarathy, A.B., Grant, P.E., Yodh, A.G., and Franceschini, M.A., Diffuse correlation spectroscopy for measurement of cerebral blood flow: future prospects. Neurophotonics 1, 011009 (2014). https://doi.org/10.1117/1.NPh.1.1.011009. [pdf]
Lohr, M.A, Still, T., Ganti, R., Gratale, M.D., Davidson, Z.S., Aptowicz, K.B., Goodrich, C.P., Sussman, D.M., and Yodh, A.G., Vibrational and structural signatures of the crossover between dense glassy and sparse gel-like attractive colloidal packings. Physical Review E 90, 062305, https://doi.org/10.1103/PhysRevE.90.062305 (2014). [pdf]
Lynch, J.M., Buckley, E.M., Schwab, P.J., McCarthy, A.L., Winters, M.E., Busch, D.R., Xiao, R., Goff, D.A., Nicolson, S.C., Montenegro, L.M., Fuller, S., Gaynor, J.W., Spray, T.L., Yodh, A.G., Naim, M.Y. and Licht, D.J. Time to surgery and preoperative cerebral hemodynamics predict postoperative white matter injury in neonates with hypoplastic left heart syndrome. Journal of Thoracic and Cardiovascular Surgery 148, 2181-2188, PMID:25109755, https://doi.org/10.1016/j.jtcvs.2014.05.08 (2014). [pdf]
Baker, W.B., Parthasarathy, A.B., Busch, D.R., Mesquita, R.C., Greenberg, J.H., and Yodh, A.G., Modified Beer-Lambert law for blood flow, Biomedical Optics Express, 5, No. 11, https://doi.org/10.1364/BOE.5.004053, 2014. [pdf]
Edwards, C., Zhou, R.J., Hwang, S.W., McKeown, S.J., Wang, K.Y., Bhaduri, B, Ganti, R., Yunker, P.J., Yodh, A.G., Rogers, J.A., Goddard, L.L., and Popescu, G., Diffraction phase microscopy: monitoring nanoscale dynamics in materials science. Applied Optics 53, G33-G43 https://doi.org/10.1364/AO.53.000G33 (2014). [pdf]
Mesquita, R.C., Favilla, C.G., Yodh, A.G., and Detre, J.A., Response to letter regarding rticle, Optical bedside monitoring of cerebral blood flow in acute ischemic stroke patients during head-of-bed manipulation, Stroke 45, e190 PMID:25034712, https://doi.org/10.1161/STROKEAHA.114.006125 (2014). [pdf]
Yunker, P.J., Chen, K., Gratale, M.D., Lohr, M.A., Still, T., Yodh, A.G., Physics in ordered and disordered colloidal matter composed of poly(N-isopropylacrylamide) microgel particles, Reports on Progress in Physics 77, 056601, https://doi.org/10.1088/0034-4885/77/5/056601 (Epub 2014). [pdf]
Kim, M.N., Edlow, B.L., Durduran, T., Frangos, S., Mesquita, R.C., Levine, J.M., Greenberg, J.H., Yodh, A.G., and Detre, J.A., Continuous optical monitoring of cerebral hemodynamics during head-of-bed manipulation in brain-injured adults. Neurocritical Care 20, 443-453, https://doi.org/10.1007/s12028-013-9849-7 (2014). [pdf]
Choe, R., Putt, M.E., Carlile, P.M., Durduran, T., Giammarco, J.M., Busch, D.R., Jung, K.W., Czerniecki, B.J., Tchou, J., Feldman, M.D., Mies, C., Rosen, M.A., Schnall, M.D., DeMichele A., and Yodh, A.G., Optically measured microvascular blood flow contrast of malignant breast tumors. PLOS ONE 9, e99683, https://doi.org/10.1371/journal.pone.0099683 (2014). [pdf]
Favilla, C.G., Mesquita, R.C., Mullen, M., Durduran, T., Lu, X.P., Kim, M.N., Minkoff, D.L., Kasner, S.E., Greenberg, J.H., Yodh, A.G., and Detre, J.A., Optical Bedside Monitoring of Cerebral Blood Flow in Acute Ischemic Stroke Patients During Head-of-Bed Manipulation. Stroke 45, 1269-1274, (2014). [pdf]
Lohr, M.A., Cavallaro, M., Beller, D.A., Stebe, K.J., Kamien, R.D., Collings, P.J. and Yodh, A.G. Elasticity-dependent self-assembly of microtemplated chromonic liquid crystal films. Soft Matter 10, 3477–3484, https://doi.org/10.1039/c3sm53170h (2014). [pdf]
Jain, V., Buckley, E.M., Licht, D.J., Lynch, J.M., Schwab, P.J., Naim, M.Y., Lavin, N.A., Nicolson, S.C., Montenegro, L.M., Yodh, A.G. and Wehrli, F.W. Cerebral oxygen metabolism in neonates with congenital heart disease quantified by MRI and optics. Journal of Cerebral Blood Flow and Metabolism, 34, 380-388, https://doi.org/10.1038/jcbfm.2013.214 (2014). [pdf]
Jeong, J., Han, G., Johnson, A.T.C., Collings, P.J., Lubensky, T.C., and Yodh, A.G., Homeotropic Alignment of Lyotropic Chromonic Liquid Crystals Using Noncovalent Interactions. Langmuir, 30 (10), 2914–2920, https://doi.org/10.1021/la404893t (2014). [pdf]
Basu, A., Xu, Y., Still, T., Arratia, P.E., Zhang, Z., Nordstrom, K.N., Rieser, J.M., Gollub, J.P., Durian, D.J., and Yodh, A.G., Rheology of soft colloids across the onset of rigidity: scaling behavior, thermal, and non-thermal responses. Soft Matter, 10, 3027-3035 https://doi.org/10.1039/C3SM52454J (2014). [pdf]
Durduran, T., and Yodh, A.G., Diffuse correlation spectroscopy for non-invasive, micro-vascular cerebral blood flow measurement. Neuroimage 85, 51-63 https://doi.org/10.1016/j.neuroimage.2013.06.017 (2014). [pdf]
Busch, D.R., Choe,, R., Durduran, T., Friedman, D.H., Baker, W.B., Maidment, A.D., Rosen, M.A., Schnall, M.D., and Yodh, A.G., Blood flow reduction in breast tissue due to mammographic compression. Academic Radiology 21, 151–161 https://doi.org/10.1016/j.acra.2013.10.009 (2014). [pdf]
Lynch, J.M., Buckley, E.M., Schwab, P.J., Busch, D.R., Hanna, B.D., Putt, M.E., Licht, D.J., and Yodh, A.G., Noninvasive optical quantification of cerebral venous oxygen saturation in humans. Academic Radiology 21, 162–167 https://doi.org/10.1016/j.acra.2013.10.013 (2014). [pdf]
Jeong, J., Davidson, Z.S., Collings, P.J., Lubensky, T.C., and Yodh, A.G., Chiral symmetry breaking and surface faceting in chromonic liquid crystal droplets with giant elastic anisotropy. Proceedings of the National Academy of Sciences USA 111, 1742-1747 PMCID: PMC3918782, https://doi.org/10.1073/pnas.1315121111 (2014). [pdf]
Still, T., Goodrich. C.P., Chen, K., Yunker, P.J., Schoenholz, S., Liu, A.J., and Yodh, A.G., Phonon dispersion and elastic moduli of two-dimensional disordered colloidal packings of soft particles with frictional interactions. Physical Review E 89, 012301 https://doi.org/10.1103/PhysRevE.89.01230 (2014). [pdf]
Yunker, P.J., Lohr, M.A., Still, T., Borodin, A., Durian, D.J., and Yodh, A.G., Comment on “Effects of Particle Shape on Growth Dynamics at Edges of Evaporating Drops of Colloidal Suspensions” Physical Review Letters 111, 209602 https://doi.org/10.1103/PhysRevLett.111.2096012 (2013). [pdf]
Devor, D. Bandettini, P.A., Boas, D.A., Bower, J.M., Buxton, R.B., Cohen, L.B., Dale, A.M., Einevoll, G.T., Fox, P.T., Franceschini, M.A, Friston, K.J., Fujimoto, A.G., Geyer, M.A, Greenberg, J.H., Halgren, G., Hämäläinen, M.S, Helmchen, .F, Hyman, B.T, Jasanoff, A., Jernigan, T.L., Judd, L.L., Kim, S.-G. Kleinfeld, D., Kopell, N.J., Kutas, M., Kwong, K.K., Larkum, M.E., Lo, E.H., Magistretti, P.J., Mandeville, J.B., Masliah, E., Mitra, P.P., Mobley, W.C., Moskowitz, MA., Nimmerjahn, A., Reynolds, J.H., Rosen, B.R., Salzberg, B.M., Schaffer, C.B., Silva, G.A., So, P.T.C., Spitzer, N.C., Tootell, R.B., Van Essen, D.C., Vanduffel, W., Vinogradov, S.A., Wald, L.L., Wang, L.V., Weber, B., and Yodh, A.G., The Challenge of Connecting the Dots in the B.R.A.I.N., Neuron 80, 270-274 (2013). PMID:24139032, PMCID:PMC3864648, https://doi.org/10.1016/j.neuron.2013.09.008. [pdf]
Mesquita, R.C., D’Souza, A., Bilfinger, T.V., Galler, R.M., Emanuel, A., Schenkel1, S.S., Yodh, A.G., Floyd, T.F., Optical Monitoring and Detection of Spinal Cord Ischemia, PLOS ONE 8 (12): e83370. https://doi.org/10.1371/journal.pone.0083370 (2013). [pdf]
Chen, K., Still, T., Schoenholz, S., Aptowicz, K.B., Schindler, M., Maggs, A.C., Liu, A.J., and Yodh, A.G., Phonons in two-dimensional soft colloidal crystals. Physical Review E 88, https://doi.org/10.1103/PhysRevE.88.022315 (2013). [pdf]
Yunker, P.J., Durian, D.J, and Yodh, A.G., Coffee rings and coffee disks: Physics on the edge. Physics Today 66, 60 https://doi.org/10.1063/PT.3.2093 (2013). [pdf]
Mesquita, R.C., Schenkel, S.S., Minkoff, D.L., Lu, X.P., Favilla, C.G., Vora, P.M., Busch, D.R., Chandra, M., Greenberg, J.H., Detre, J.A., and Yodh, A.G., Influence of probe pressure on the diffuse correlation spectroscopy blood flow signal: extra-cerebral contributions. Biomedical Optics Express 4, 978-994 https://doi.org/10.1364/BOE.4.000978 (2013). [pdf]
Mesquita, R.C., Faseyitan, O.K., Turkeltaub, P.E., Buckley, E.M., Thomas, A., Kim, M.N., Durduran, T., Greenberg, J.H., Detre, J.A., Yodh, A.G., Hamilton, R.H., Blood flow and oxygenation changes due to low-frequency repetitive transcranial magnetic stimulation of the cerebral cortex. Journal of Biomedical Optics 18, https://doi.org/10.1117/1.JBO.18.6.067006 (2013). [pdf]
Mesquita, R.C., Putt, M., Chandra, M., Yu, G., Xing, X., Han, S.W., Lech, G., Shang, Y., Durduran, T., Zhou, C., Yodh, A.G., and Mohler, E.R., Diffuse optical characterization of an exercising patient group with peripheral artery disease. Journal of Biomedical Optics 18, https://doi.org/10.1117/1.JBO.18.5.057007 (2013). [pdf]
Yunker, P.J., Yodh, A.G., and Still, T., Colloidal shape effects in evaporating drops. Proceedings of the International School of Physics “Enrico Fermi” Course CLXXXIV “Physics of Complex Colloids“, eds., Bechinger, C., Sciortino, F., and Ziherl, P. (IOS, Amsterdam; SIF, Bologna) https://doi.org/10.3254/978-1-61499-278-3-447 (2013). [pdf]
Yunker, P.J., Zhang, Z.X., Gratale, M., Chen, K. and Yodh, A.G., Relationship between neighbor number and vibrational spectra in disordered colloidal clusters with attractive interactions. J. Chem. Phys. 138, 12A525, https://doi.org/10.1063/1.4774076 (2013). [pdf]
Still, T., Chen, K. Alsayed, A.M., Aptowicz, K.B., and Yodh, A.G., Synthesis of micrometer-size poly(N-isopropylacrylamide) microgel particles with homogeneous crosslinker density and diameter control. Journal of Colloid and Interface Sciences 405, 96 (2013). https://doi.org/10.1016/j.jcis.2013.05.042 [pdf]
Busch, D. R., Choe, R., Durduran, T., Yodh, A. G., Toward Noninvasive Characterization of Breast Cancer and Cancer Metabolism with Diffuse Optics. PET Clinics, 8, 345-365 (2013). https://doi.org/10.1016/j.cpet.2013.04.004 [pdf]
Shokef, Y., Han, Y., Souslov, A., Yodh, A. G., Lubensky, T. C., Buckled colloidal monolayers connect geometric frustration in soft and hard matter. Soft Matter, 9, 6565, https://doi.org/10.1039/c3sm00069a (2013).[pdf]
Gratale, M.D., Yunker, P.J., Chen, K., Still, T., Aptowicz, K.B., and Yodh, A.G., Phonons in two-dimensional colloidal crystals with bond-strength disorder. Physical Review E 87, 052301 (2013). https://doi.org/10.1103/PhysRevE.87.052301 [pdf]
Buckley, E.M., Naim, M.Y., Lynch, J.M., Goff, D.A., Schwab, P.J., Diaz, L.K., Nicolson, S.C., Montenegro, L.M., Lavin, N.A., Durduran, T., Spray, T.L., Gaynor, J.W., Putt, M.E., Yodh, A.G., Fogel, M.A., and Licht, D.J., Sodium bicarbonate causes dose-dependent increases in cerebral blood flow in infants and children with single-ventricle physiology. Pediatric Research 73, 668-673 (2013). https://doi.org/10.1038/pr.2013 [pdf]
Ould-Moussa, N., Blanc, C., Zamora-Ledezma, C., Lavrentovich, O.D., Smalyukh, I.I., Islam, M.F., Yodh, A.G., Maugey, M., Poulin, P., Anglaret, E., and Nobili, M., Dispersion and orientation of single- walled carbon nanotubes in a chromonic liquid crystal. Liquid Crystals 40, 1628-1635 https://doi.org/10.1080/02678292.2013.772254 (2013). [pdf]
Yunker, P.J., Lohr, M.A., Still, T., Borodin, A., Durian, D.J., and Yodh, A.G., Effects of Particle Shape on Growth Dynamics at Edges of Evaporating Drops of Colloidal Suspensions, Phys. Rev. Lett. 110, 035501 (2013). https://doi.org/10.1103/PhysRevLett.110.035501 [pdf]
Buckley, E.M., Lynch, J.M., Goff, D.A., Schwab, P.J., Baker, W.B., Durduran, T., Busch, D.R., Nicolson, S.C., Montenegro, L.M., Naim, M.Y., Xiao, R., Spray, T.L., Yodh, A.G., Gaynor, J.W., Licht, D.J., Early postoperative changes in cerebral oxygen metabolism following neonatal cardiac surgery: Effects of surgical duration. The Journal of Thoracic and Cardiovascular Surgery, 145, 196-205, (2013). https://doi.org/10.1016/j.jtcvs.2012.09.057 [pdf]
Busch, D.R., Choe, R., Rosen, M.A., Guo, W., Durduran, T., Feldman, M.D., Mies, C., Czerniecki, B.J., Tchou, J., DeMichele, A., Schnall, M.D., and Yodh, A.G., Optical malignancy parameters for monitoring progression of breast cancer neoadjuvant chemotherapy. Biomedical Optics Express 4, 105-121 (2013). https://doi.org/10.1364/BOE.4.000105 [pdf]
Baker, W.B., Sun, Z.H., Hiraki, T., Putt, M.E., Durduran, T., Reivich, M., Yodh, A.G., and Greenberg, J.H., Neurovascular coupling varies with level of global cerebral ischemia in a rat model. Journal of Cerebral Blood Flow and Metabolism 33, 97-105 (2013). https://doi.org/10.1038/jcbfm.2012.137 [pdf]
Ban, H.Y., Busch, D.R., Pathak, S., Moscatelli, F.A., Machida, M., Schotland, J.C., Markel, V.A., and Yodh, A.G., Diffuse optical tomography in the presence of a chest wall. Journal of Biomedical Optics 18, 026016 (2013). https://doi.org/10.1117/1.JBO.18.2.026016 [pdf]
Wen, Q., Basu, A., Janmey, P.A., and Yodh, A.G., Non-affine deformations in polymer hydrogels. Soft Matter 8, 8039-8049 (2012). https://doi.org/10.1039/c2sm25364j [pdf]
Yunker, P.J., Gratale, M., Lohr, M.A., Still, T., Lubensky, T.C., and Yodh, A.G., Influence of particle shape on bending rigidity of colloidal monolayer membranes and particle deposition during droplet evaporation in confined geometries. Physical Review Letters 108, 228303 (2012). https://doi.org/10.1103/PhysRevLett.108.228303 [pdf]
Buckley, E.M., Hance, D., Pawlowski, T., Lynch, J., Wilson, F.B., Mesquita, R.C., Durduran, T., Diaz, L.K., Putt, M.E., Licht, D.J., Fogel, M.A., and Yodh, A.G., Validation of diffuse correlation spectroscopic measurement of cerebral blood flow using phase-encoded velocity mapping magnetic resonance imaging. Journal of Biomedical Optics 17, 037007 (2012). https://doi.org/10.1117/1.JBO.17.3.037007 [pdf]
Skuli, N., Majmundar, A.J., Krock, B.L., Mesquita, R.C., Mathew, L.K., Quinn, Z.L., Runge, A. Liu, L.P., Kim, M.N., Liang, J.M., Schenkel, S., Yodh, A.G., Keith, B., and Simon, M.C., Endothelial HIF-2 regulates murine pathological angiogenesis and revascularization processes. Journal of Clinical Investigation 122, 1427-1443 (2012). https://doi.org/10.1172/JCI57322 [pdf]
Mesquita, R.C., Han, S.W., Miller, J., Schenkel, S.S., Pole, A., Esipova, T.V., Vinogradov, S.A., Putt, M.E., Yodh, A.G., and Busch, T.M., Tumor blood flow differs between mouse strains: consequences for vasoresponse to photodynamic therapy. PLOS ONE 7, e37322 (2012). https://doi.org/10.1371/journal.pone.0037322 [pdf]
Still, T., Yunker, P.J., and Yodh, A.G., Surfactant-induced marangoni eddies alter the coffee-rings of evaporating colloidal drops.Langmuir 28, 4984-4988 (2012). https://doi.org/10.1021/la204928m [pdf]
Majmundar, A.J., Skuli, N., Mesquita, R.C., Kim, M.N., Yodh, A.G., Nguyen-McCarty, M., and Simon, M.C., O2 Regulates skeletal muscle progenitor differentiation through phosphatidylinositol 3-Kinase/AKT signaling. Molecular and Cellular Biology 32, 36-49 (2012). https://doi.org/10.1128/mcb.05857-11 [pdf]
Tellis, G.M., Mesquita, R.C., and Yodh, A.G., Use of diffuse correlation spectroscopy to measure brain blood flow differences during speaking and nonspeaking tasks for fluent speakers and persons who stutter, Perspectives on Fluency and Fluency Disorders 21, 96-106 (2011). https://doi.org/10.1044/ffd21.3.96 [pdf]
Zhang, Z., Yunker, P.J., Habdas, P., and Yodh, A.G., Cooperative rearrangement regions and dynamical heterogeneities in colloidal glasses with attractive versus repulsive interactions. Physical Review Letters 107 208303-1-208303-5 (2011). https://doi.org/10.1063/1.3372618 [pdf]
Elwell, C.E., Boas, D.A., Cooper, C.E., Delpy, D., Ferrari, M., Quaresima, V, and Yodh, A.G., Britton Chance 1913-2010 Dedication. Philosophical Transactions of the Royal Society A — Mathematical Physical and Engineering Sciences 369, 4380-4389 2011. https://doi.org/10.1098/rsta.2011.0313 [pdf]
Chung, S.H., Mehta, R., Tromberg, B.J., and Yodh, A.G., Non-invasive measurement of deep tissue temperature changes caused by apoptosis during breast cancer neoadjuvant chemotherapy: A case study. Journal of Innovative Optical Health Sciences 4, 361-372 (2011). https://doi.org/10.1142/s1793545811001708 [pdf]
Mesquita, R.C., Durduran, T., Yu, G., Buckley, E.M., Kim, M.N., Zhou, C., Choe, R., Sunar, U., Yodh, A.G., Direct measurement of tissue blood flow and metabolism with diffuse optics. Philosophical Transactions of the Royal Society A 369, 4358-4379 (2011). https://doi.org/10.1098/rsta.2011.0232 [pdf]
Yunker, P.J., Still, T., Lohr, M.A., and Yodh, A.G., Suppression of the coffee-ring effect by shape-dependent capillary interactions. Nature 476, 308-311 (2011). https://doi.org/10.1038/nature10344 [pdf]
Chen, K., Manning, M.L., Yunker, P.J., Ellenbroek, W.G., Zhang, Z., Liu, A.J., and Yodh, A.G., Measurement of correlations between low-frequency vibrational modes and particle rearrangements in
quasi-two-dimensional colloidal glasses. Physical Review Letters 107, 108301 (2011). https://doi.org/10.1103/PhysRevLett.107.108301 [pdf]
Susumu, K., Fisher, J.A.N., Zheng, J., Beratan, D.N., Yodh, A.G., and Therien, M.J., Two-photon absorption properties of proquinoidal D-A-D and A-D-A quadrupolar chromophores. Journal of Physical Chemistry A 115, 5525-5539 (2011). https://doi.org/10.1021/jp2000738 [pdf]
Mesquita, R.C. and Yodh, A.G., Diffuse optics: Fundamentals and tissue applications, in Proceedings of the International School of Physics “Enrico Fermi” Course CLXXIII “Nano Optics and Atomics: Transport of Light and Matter Waves,” Kaiser, R., Weirsma, D.S., and Fallini, L., eds., IOS Press: Amsterdam. pp. 51-74 (2011). [pdf]
Yu, G., Durduran, T., Zhou, C., Cheng, R., and Yodh, A.G., Near-infrared diffuse correlation spectroscopy for assessment of tissue blood flow, in Handbook of Biomedical Optics, Boas, D.A., Pitris, C., and Ramanujam, N., eds., CRC Press: Boca Raton. pp. 195-216 (2011).[pdf]
Yunker, P.J., Chen, K., Zhang, Z., and Yodh, A.G., Phonon spectra, nearest neighbors, and mechanical stability of disordered colloidal clusters with attractive interactions. Physical Review Letters 106, 225503 (2011). https://doi.org/10.1103/PhysRevLett.106.225503 [pdf]
Alsayed, A.M., Han, Y., and Yodh, A.G., Melting and geometric frustration in temperature-sensitive colloids, in Microgel Suspensions, Fernandez-Nieves, A., Wyss, H.M., Mattsson, J., and Weitz, D.A., eds., Wiley-VCH: Weinheim, Germany pp. 229-281 (2011).[pdf]
Basu, A., Wen, Q., Mao, X., Lubensky, T.C., Janmey, P.A., and Yodh, A.G., Nonaffine displacements in flexible polymer networks. Macromolecules 44, 1671-1679 (2011). https://doi.org/10.1021/ma1026803 [pdf]
Yunker, P.J., Chen, K., Zhang, Z.X., Ellenbroek, W.G., Liu, A.J., and Yodh, A.G., Rotational and translational phonon modes in glasses composed of ellipsoidal particles. Physical Review E 83, 011403 (2011). https://doi.org/10.1103/PhysRevE.83.011403 [pdf]
Peng, Y., Wang, Z.-R., Alsayed, A.M., Yodh, A.G., and Han, Y., Melting of multilayer colloidal crystals confined between two walls. Physical Review E 83, 011404 (2011). https://doi.org/10.1103/PhysRevE.83.011404 [pdf]
Ye, X.C., Collins, J.E., Kang, Y.J., Chen, J., Chen, D.T.N., Yodh, A.G., Murray, C.B., Morphologically controlled synthesis of colloidal upconversion nanophosphors and their shape-directed self-assembly. Proceedings of the National Academy of Sciences of the United States of America 107, 22430-22435 (2010). https://doi.org/10.1073/pnas.1008958107 [pdf]
Nordstrom, K.N., Verneuil, E., Arratia, P.E., Basu, A., Zhang, Z., Yodh, A.G., Gollub, J.P., and Durian, D.J., Microfluidic rheology of soft colloids above and below jamming. Physical Review Letters 105, 175701 (2010). https://doi.org/10.1103/PhysRevLett.105.175701 [pdf]
Mesquita, R.C., Skuli, N., Kim, M.N., Liang, J., Schenkel, S., Majmundar, A.J., Simon, M.C., and Yodh, A.G., Hemodynamic and metabolic diffuse optical monitoring in a mouse model of hindlimb ischemia. Biomedical Optics Express 1, 1173-1187 (2010). https://doi.org/10.1364/boe.1.001173 [pdf]
Shang, Y., Symons, T.B., Durduran, T., Yodh, A.G., and Yu, G., Effects of muscle fiber motion on diffuse correlation spectroscopy blood flow measurements during exercise. Biomedical Optics Express 1, 500-511 (2010). https://doi.org/10.1364/boe.1.001173 [pdf]
Chen, K., Ellenbroek, W.G., Zhang, Z.X., Chen, D.T.N., Yunker, P.J., Henkes, S., Brito, C., Dauchot, O., van Saarloos, W., Liu, A.J., and Yodh, A.G., Low-frequency vibrations of soft colloidal glasses. Physical Review Letters 105, 025501 (2010). https://doi.org/10.1103/PhysRevLett.105.025501 [pdf]
Luckl, J., Baker, W., Sun, Z-H., Durduran, T., Yodh, A.G., and Greenberg, J.H., The biological effect of contralateral forepaw stimulation in rat focal cerebral ischemia: a multispectral optical imaging study. Frontiers in Neuroenergetics 2, 1-9 (2010). https://doi.org/10.3389/fnene.2010.00019 [pdf]
Daniel T.N. Chen, Qi Wen, Paul A. Janmey, John C. Crocker, and Arjun G. Yodh, Rheology of Soft Materials, Annual Review of Condensed Matter Physics, 1, 301-322 (2010). https://doi.org/10.1146/annurev-conmatphys-070909-104120 [link]
Yunker, P., Zhang, Z.X., and Yodh, A.G., Observation of the disorder-induced crystal-to-glass transition. Physical Review Letters 104, 015701 (2010). https://doi.org/10.1103/PhysRevLett.104.015701 [pdf]
Chen, D.T.N., Chen, K., Hough, L.A., Islam, M.F., and Yodh, A.G., Rheology of carbon nanotube networks during gelation. Macromolecules 43, 2048-2053 (2010). https://doi.org/10.1021/ma902230a [pdf]
Edlow, B.L., Kim, M.N., Durduran, T., Zhou, C., Putt, M.E., Yodh, A.G., Greenberg, J.H., and Detre, J.A., The effects of healthy aging on cerebral hemodynamic responses to posture change. Physiological Measurement 31, 477-495 (2010). https://doi.org/10.1088/0967-3334/31/4/002 [pdf]
Lohr, M.A., Alsayed, A.M., Chen, B.G., Zhang, Z., Kamien, R.D., and Yodh, A.G., Helical packings and phase transformations of soft spheres in cylinders. Physical Review E (Rapid Communications) 81, 040401 (2010). https://doi.org/10.1103/PhysRevE.81.040401 [pdf]
Wang, Z., Alsayed, A.M., Yodh, A.G., and Han, Y., Two-dimensional freezing criteria for crystallizing colloidal monolayers. Journal of Chemical Physics 132, 154501 (2010). ttps://doi.org/10.1063/1.3372618 [pdf]
Busch, D.R., Guo, W.S., Choe, R., Durduran, T., Feldman, M.D., Mies, C., Rosen, M.A., Schnall, M.D., Czerniecki, B.J., Tchou, J., DeMichele, A., Putt, M.E., and Yodh, A.G., Computer aided automatic detection of malignant lesions in diffuse optical mammography. Medical Physics 37, 1840-1849 (2010). https://doi.org/10.1118/1.3314075 [pdf]
Kim, M.N., Durduran, T., Frangos, S., Edlow, B.L., Buckley, E.M., Moss, H.E., Zhou, C., Yu, G.Q., Choe, R., Maloney-Wilensky, E., Wolf, R.L., Grady, M.S., Greenberg, J.H., Levine, J.M., Yodh, A.G., Detre, J.A., and Kofke, W.A., Noninvasive measurement of cerebral blood flow and blood oxygenation using near-infrared and diffuse correlation spectroscopies in critically brain-injured adults. Neurocritical Care 12, 173-180 (2010). https://doi.org/10.1007/s12028-009-9305-x [pdf]
Durduran, T., Zhou, C., Buckley, E.M., Kim, M.N., Yu, G., Choe, R., Gaynor, J.W., Spray, T.L., Durning, S.M., Mason, S.E., Montenegro, L.M., Nicolson, S.C., Zimmerman, R.A., Putt, M.E., Wang, J., Greenberg, J.H., Detre, J.A., Yodh, A.G., and Licht, D.J., Optical measurement of cerebral hemodynamics and oxygen metabolism in neonates with congenital heart defects. Journal of Biomedical Optics 15, 037004 (2010). https://doi.org/10.1117/1.3425884 [pdf]
Peng, Y., Wang, Z., Alsayed, A.M., Yodh, A.G., and Han, Y., Melting of colloidal crystal films. Physical Review Letters 104, 205703 (2010). https://doi.org/10.1103/PhysRevLett.104.205703 [pdf]
Durduran, T., Choe, R., Baker, W.B, and Yodh, A.G., Diffuse optics for tissue monitoring and tomography. Reports on Progress in Physics, 73, 076701 (2010). https://doi.org/10.1088/0034-4885/73/7/076701 [pdf]
Cerniglia, G.J., Pore, N., Tsai, J.H., Schultz, S., Mick, R. Choe, R., Xing, X., Durduran, T., Yodh, A.G., Evans, S.M., Koch, C.J., Hahn, S.M., Quon, H., Sehgal, C.M., Lee, W.M.F., and Maity, A., Epidermal Growth Factor Receptor Inhibition Modulates the Microenvironment by Vascular Normalization to Improve Chemotherapy and Radiotherapy Efficacy. PLOS ONE 4, e6539 (2009). https://doi.org/10.1371/journal.pone.0006539 [pdf]
Busch, T.M., Xing, X., Yu, G., Yodh, A., Wileyto, E.P., Wang, H.W., Durduran, T., Zhu, T.C., and Wang, K.K.H., Fluence rate-dependent intratumor heterogeneity in physiologic and cytotoxic responses to Photofrin photodynamic therapy. Photochemical & Photobiological Sciences 8, 1683-1693 (2009). https://doi.org/10.1039/b9pp00004f [pdf]
Peter Yunker, Zexin Zhang, Kevin B. Aptowicz, and A.G. Yodh, Irreversible Rearrangements, Correlated Domains, and Local Structure
in Aging Glasses, Physical Review Letters, 103, 11, 115701 (2009). https://doi.org/10.1103/PhysRevLett.103.115701 [pdf]
Durduran, T., Zhou, C., Edlow, B.L., Yu, G., Choe, R., Kim, M.N., Cucchiara, B.L., Putt, M.E., Shah, Q., Kasner, S.E., Greenberg, J.H., Yodh, A.G., and Detre, J.A., Transcranial optical monitoring of cerebrovascular hemodynamics in acute stroke patients. Optics Express 17, 3884-3902 (2009). https://doi.org/10.1364/OE.17.003884 [pdf]
Luckl, J., Zhou, C., Durduran, T., Yodh, A.G., and Greenberg, J.H., Characterization of periinfarct flow transients with laser speckle and Doppler after middle cerebral artery occlusion in the rat. Journal of Neuroscience Research 87, 1219-1229 (2009). https://doi.org/10.1002/jnr.21933 [pdf]
Choe, R., Konecky, S.D., Corlu, A., Lee, K., Durduran, T., Busch, D.R., Pathak, S., Czerniecki, B.J., Tchou, J., Fraker, D.L., DeMichele, A., Chance, B., Arridge, S.R., Schweiger, M., Culver, J.P., Schnall, M.D., Putt, M.E., Rosen, M.A., and Yodh, A.G., Differentiation of benign and malignant breast tumors by in-vivo three-dimensional parallel-plate diffuse optical tomography. Journal of Biomedical Optics 14, 024020 (2009). https://doi.org/10.1117/1.3103325 [pdf]
Fisher, J.A.N., Susumu, K., Therien, M.J., and Yodh, A.G., One- and two-photon absorption of highly conjugated multiporphyrin systems in the two-photon soret transition region. Journal of Chemical Physics 130, 134506 (2009). https://doi.org/10.1063/1.3089795 [pdf]
Zhang, Z., Xu, N., Chen, D.T.N., Yunker, P., Alsayed, A., Aptowicz, K.B., Habdas, P., Liu, A.J., Nagel, S., and Yodh, A.G., Thermal vestige of the zero-temperature jamming transition. Nature 459, 230-233 (2009). https://doi.org/10.1038/nature07998 [pdf]
Han, Y.L., Alsayed, A., Nobili, M., and Yodh, A.G., Quasi-two-dimensional diffusion of single ellipsoids: Aspect ratio and confinement effects. Physical Review E 80, 011403-1-011403-6 (2009). https://doi.org/10.1103/PhysRevE.80.011403 [pdf]
Buckley, E.M., Cook, N.M., Durduran, T., Kim, M.N., Zhou, C., Choe, R., Yu, G., Shultz, S., Sehgal, C.M., Licht, D.J., Arger, P.H., Putt, M.E., Hurt, H., and Yodh, A.G., Cerebral hemodynamics in preterm infants during positional intervention measured with diffuse correlation spectroscopy and transcranial Doppler ultrasound. Optics Express 17, 12571-12581 (2009). https://doi.org/10.1364/OE.17.012571 [pdf]
Zhou, C., Eucker, S.A., Durduran, T., Yu, G., Ralston, J., Friess, S.H., Ichord, R.N., Margulies, S.S, and Yodh, A.G., Diffuse optical monitoring of hemodynamic changes in piglet brain with closed head injury. Journal of Biomedical Optics 14, 034015-1-034015-11 (2009). https://doi.org/10.1117/1.3146814 [pdf]
Latka, A., Han, Y., Alsayed, A.M., Schofield, A.B., Yodh, A.G., and Habdas, P., Particle dynamics in colloidal suspensions above and below the glass-liquid re-entrance transition. Europhysics Letters 86, 58001-1-58001-5 (2009). https://doi.org/10.1209/0295-5075/86/58001 [pdf]
Konecky, S.D., Choe, R., Corlu, A., Lee, K., Wiener, R., Srinivas, S.M., Saffer, J.R., Freifelder, R., Karp, J.S., Jajjioui, N., Azar, F., and Yodh, A.G., Comparison of diffuse optical tomography of human breast with whole-body and breast-only positron emission tomography. Medical Physics 35, 446-455 (2008). https://doi.org/10.1118/1.2826560 [pdf]
Han, Y., Ha, N.Y., Alsayed, A.M., and Yodh, A.G., Melting of two-dimensional tunable-diameter colloidal crystals. Physical Review E 77, 041406-1-041406-7 (2008). https://doi.org/10.1103/PhysRevE.77.041406 [pdf]
Fisher J.A.N., Barchi, J.R., Welle, C.G., Kim, G-H., Kosterin, P., Obaid, A.L., Yodh, A.G., Contreras, D., and Salzberg, B.M., Two-photon excitation of potentiometric probes enables optical recording of action potentials from mammalian nerve terminals in situ. Journal of Neurophysiology 99, 1545-1553 (2008). https://doi.org/10.1152/jn.00929.2007 [pdf]
Konecky, S.D., Panasyuk, G.Y., Lee, K., Markel, V., Yodh, A.G., and Schotland J.C., Imaging complex structures with diffuse light. Optics Express 16, 5048-5060 (2008). https://doi.org/10.1364/OE.16.005048 [pdf]
Zhou, C., Shimazu, T., Durduran, T., Luckl, J., Kimberg, D.Y., Yu, G., Chen, X-H., Detre, J.A., Yodh, A.G., and Greenberg, J.H., Acute functional recovery of cerebral blood flow after forebrain ischemia in rat. Journal of Cerebral Blood Flow & Metabolism 28(7), 1275-1284 (2008). https://doi.org/10.1038/jcbfm.2008.21 [pdf]
Perini, R., Choe, R., Yodh, A.G., Sehgal, C., Divgi, C.R., and Rosen, M.A., Non-invasive assessment of tumor neovasculature: techniques and clinical applications. Cancer Metastasis Review 27, 615-630 (2008).
https://doi.org/10.1007/s10555-008-9147-6
[pdf]
Tromberg, B.J., Pogue, B.W., Paulsen, K.D., Yodh, A.G., Boas, D.A., and Cerussi, A.E., Assessing the future of diffuse optical imaging technologies for breast cancer management. Medical Physics 35, 2443-2451 (2008). https://doi.org/10.1118/1.2919078 [pdf]
Konecky, S.D., and Yodh, A.G., Diffuse optical imaging and PET imaging, in Translational Multimodality Optical Imaging, Azar, F.S., and Intes, X., eds., Artech House: Boston, p. 205-224 (2008).[pdf]
Choe, R., and Yodh, A.G., Diffuse optical tomography of the breast, in Emerging Technologies in Breast Imaging and Mammography, Suri, J.S., Rangayyan, R.M., and Laxminarayan, S., eds., American Scientific Publishers: Stevenson Ranch, CA, p. 317-342 (2008).[pdf]
Han, Y., Shokef, Y., Alsayed, A.M., Yunker, P., Lubensky, T.C., and Yodh, A.G., Geometric frustration in buckled colloidal monolayers. Nature 456, 898-903 (2008). https://doi.org/10.1038/nature07595 [pdf]
Yu, G.Q., Floyd, T.F., Durduran, T., Zhou, C., Wang, J., Detre, J.A., and Yodh, A.G., Validation of diffuse correlation spectroscopy for muscle blood flow with concurrent arterial spin labeled perfusion MRI. Optics Express 15, 1064-1075 (2007). https://doi.org/10.1364/oe.15.001064 [pdf]
Bryning, M.B., Milkie, D.E., Islam, M.F., Hough, L.A., Kikkawa, J.M., and Yodh, A.G., Carbon nanotube aerogels. Advanced Materials 19, 661-664 (2007). https://doi.org/10.1002/adma.200601748 [pdf]
Wang, H.W., Finlay, J.C., Lee, K., Zhu, T.C., Putt, M.E., Glatstein, E., Koch, C.J., Evans, S.M., Hahn, S.M., Busch, T.M., Yodh, A.G., Quantitative comparison of tissue oxygen and motexafin lutetium uptake by ex vivo and noninvasive in vivo techniques in patients with intraperitoneal carcinomatosis. Journal of Biomedical Optics 12, 034023 (2007). https://doi.org/10.1117/1.2743082 [pdf]
Corlu, A., Choe, R., Durduran, T., Rosen, M.A., Schweiger, M., Arridge, S.R., Schnall, M.D., Yodh, A.G., Three-dimensional in vivo fluorescence diffuse optical tomography of breast cancer in humans. Optics Express 15, 6696-6716 (2007). https://doi.org/10.1364/oe.15.006696 [pdf]
Chen, D.T.N., Lau, A.W.C., Hough, L.A., Islam, M.F., Goulian, M., Lubensky, T.C., and Yodh, A.G., Fluctuations and rheology in active bacterial suspensions. Physical Review Letters 99, 148302 (2007). https://doi.org/10.1103/PhysRevLett.99.148302 [pdf]
Zhou, C., Choe, R., Shah, N., Durduran, T., Yu, G., Durkin, A. Hsiang, D., Mehta, R., Butler, J., Cerussi, A., Tromberg, B.J., and Yodh, A.G. Diffuse optical monitoring of blood flow and oxygenation in human breast cancer during early stages of neoadjuvant chemotherapy. Journal of Biomedical Optics, 12, 051903 (2007). https://doi.org/10.1117/1.2798595 [pdf]
Azar, F.S., Lee, K., Khamene, A., Choe, R., Corlu, A., Konecky, S.D., Sauer, F., and Yodh, A.G. Standardized platform for coregistration of nonconcurrent diffuse optical and magnetic resonance breast images obtained in different geometries. Journal of Biomedical Optics 12, 051902 (2007). https://doi.org/10.1117/1.2798630 [pdf]
Wang, H.W., Rickter, E., Yuan, M., Wileyto, E.P., Glatstein, E., Yodh, A.G., and Busch, T.M. Effect of photosensitizer doser on fluence rate responses to photodynamic therapy. Photochem Photobiol 83, 1-9 (2007). https://doi.org/10.1111/j.1751-1097.2007.00139.x [pdf]
Sunar, U., Makonnen, S., Zhou, C., Durduran, T., Yu, G., Wang, H-W., Lee, W.M., and Yodh, A.G., Hemodynamic responses to antivascular therapy and ionizing radiation assessed by diffuse optical spectroscopies. Optics Express 15, 15507-15516 (2007). https://doi.org/10.1364/OE.15.015507 [pdf]
Wen, Q., Basu, A., Winer, J.P., Yodh, A.G., and Janmey, P.A., Local and global deformations in a strain-stiffening fibrin gel. New Journal of Physics 9, 428-1-428-10 (2007). https://doi.org/10.1088/1367-2630/9/11/428 [pdf]
Song, L., Li, H., Sunar, U., Chen, J., Corbin, I., Yodh, A.G., and Zheng, G., Naphthalocyanine-reconstituted LDL nanoparticles for in vivo cancer imaging and treatment. International Journal of Nanomedicine 2, 767-774 (2007).[pdf]
Hahn S.M., Fraker D.L., Mick R., Metz J., Busch T.M., Smith D., Zhu T., Rodriguez C., Dimofte A., Spitz F., Putt M., Rubin S.C., Menon C., Wang H.W., Shin D., Yodh A., Glatstein E., A phase II trial of intraperitoneal photodynamic therapy for patients with peritoneal carcinomatosis and sarcomatosis, Clinical Cancer Research 12 (8): 2517-2525 (2006). https://doi.org/10.1158/1078-0432.CCR-05-1625 [pdf]
Du K.L., Mick R., Busch T., Zhu T.C., Finlay J.C., Yu G., Yodh A.G., Malkowicz S.B., Smith D., Whittington R., Stripp D., Hahn S.M., Preliminary results of interstitial motexafin lutetium-mediated PDT for prostate cancer, Lasers in Surgery and Medicine 38 (5): 427-434 (2006). ). https://doi.org/10.1002/lsm.20341 [pdf]
Loudet J.C., Yodh A.G., Pouligny B., Wetting and contact lines of micrometer-sized ellipsoids, Physical Review Letters 97 (1): Art. No. 018304 (2006). https://doi.org/10.1103/PhysRevLett.97.018304 [pdf]
Zhou C., Yu G.Q., Furuya D., Greenberg J.H., Yodh A.G., Durduran T., Diffuse optical correlation tomography of cerebral blood flow during cortical spreading depression in rat brain, Optics Express 14 (3): 1125-1144 (2006). https://doi.org/10.1364/oe.14.001125 [pdf]
Fisher J.A.N., Marchenko V.A., Yodh A.G., Rogers R.F., Spatiotemporal activity patterns during respiratory rhythmogenesis in the rat ventrolateral medulla, Journal of Neurophysiology 95 (3): 1982-1991 (2006). https://doi.org/10.1152/jn.00674.2005 [pdf]
Hough L.A., Islam M.F., Hammouda B., Yodh A.G., Heiney P.A., Structure of semidilute single-wall carbon nanotube suspensions and gels, Nano Letters 6 (2): 313-317 (2006). https://doi.org/10.1021/nl051871f [pdf]
Dahl, K.N., Scaffidi, P., Islam, M.F., Yodh, A.G., Wilson, K.L., and Misteli, T., Distinct structural and mechanical properties of the nuclear lamina in Hutchinson-Gilford progeria syndrome. Proceedings of the National Academy of Sciences USA 103, 10271-10276 (2006). https://doi.org/10.1073/pnas.0601058103 [pdf]
Yu, G., Durduran, T., Zhou, C., Zhu, T.C., Finlay, J.C., Busch, T.M., Malkowicz, S.B., Hahn, S.M., and Yodh, A.G., Real-time in situ monitoring of human prostate photodynamic therapy with diffuse light. Photochem Photobiol 82, 1279-1284 (2006). https://doi.org/10.1562/2005-10-19-ra-721 [pdf]
Ross, H.M., Smelstoys, J.A., Davis, G.J., Kapatkin, A.S., Del Piero, F., Reineke, E., Wang, H., Zhu, T.C., Busch, T.M., Yodh, A.G., and Hahn, S.M., Photodynarnic therapy with motexafin lutetium for rectal cancer: A preclinical model in the dog. Journal of Surgical Research 135, 323-330 (2006). https://doi.org/10.1016/j.jss.2006.01.020 [pdf]
Han, Y., Alsayed, A.M., Nobili, M., Zhang, J., Lubensky, T.C., and Yodh, A.G., Brownian motion of an ellipsoid. Science 314, 626-630 (2006). https://doi.org/10.1126/science.1130146 [pdf]
Sunar, U., Quon, H., Durduran, T., Zhang, J., Du, J., Zhou, C., Yu, G., Choe, R., Kilger, A., Lustig, R., Loevner, L., Nioka, S., Chance, B., and Yodh, A.G., Noninvasive diffuse optical measurement of blood flow and blood oxygenation for monitoring radiation therapy in patients with head and neck tumors: a pilot study. Journal of Biomedical Optics 11, 064021-1-064021-13 (2006). https://doi.org/10.1117/1.2397548 [pdf]
Durduran T, Choe R, Yu GQ, Zhou C, Tchou JC, Czerniecki BJ, Yodh AG, Diffuse optical measurement of blood flow in breast tumors, Optics Letters 30 (21): 2915-2917 (2005). https://doi.org/10.1364/OL.30.002915 [pdf]
M. F. Islam, M. Nobili, Fangfu Ye, T. C. Lubensky, and A. G. Yodh, Cracks and Topological Defects in Lyotropic Nematic Gels, Physical Review Letters 95, 148301 (2005). https://doi.org/10.1103/PhysRevLett.95.148301 [pdf]
M. B. Bryning, D. E. Milkie, M. F. Islam, J. M. Kikkawa, and A. G. Yodh, Thermal conductivity and interfacial resistance in single-wall carbon nanotube epoxy composites, Applied Physics Letters 87, 161909 (2005). https://doi.org/10.1063/1.2103398 [pdf]
Jonathan A.N. Fisher, Brian M. Salzberg and Arjun G. Yodh, Near infrared two-photon excitation cross-sections of voltage-sensitive dyes, Journal of Neuroscience Methods 148 (1) 94-102, 2005. https://doi.org/10.1016/j.jneumeth.2005.06.027 [pdf]
Islam MF, Milkie DE, Torrens ON, Yodh AG, Kikkawa JM Magnetic heterogeneity and alignment of single wall carbon nanotubes Physical Review B, Rapid Communications 71 (20): Article # 201401 (2005). https://doi.org/10.1103/PhysRevB.71.201401 [pdf]
Johnston, D.E., Islam, M.F., Yodh, A.G., and Johnson, A.T., Electronic devices based on purified carbon nanotubes grown by high-pressure decomposition of carbonmonoxide. Nature Materials 4, 589-592 (2005). https://doi.org/10.1038/nmat1427 [pdf]
Alsayed, A.M., Islam, M.F., Zhang, J., Collings, P.J., Yodh, A.G.,
Premelting at defects within bulk colloidal crystals. Science 309,
1207-1210, (2005). https://doi.org/10.1126/science.1112399 [pdf]
Choe, R., Corlu, A., Lee, K., Durduran, T., Konecky, S.D., Grosicka-Koptyra, M., Arridge, S.R., Czerniecki, B.J., Fraker, D.L., DeMichele, A., Chance, B., Rosen, M.A., and Yodh, A.G., Diffuse optical tomography of breast cancer during neoadjuvant chemotherapy: A case study with comparison to MRI. Medical Physics 32, 1128-1139 (2005). https://doi.org/10.1118/1.1869612 [pdf]
Corlu, A., Choe, R., Durduran, T., Lee, K., Schweiger, M., Arridge, S.R., Hillman, E.M.C., and Yodh, A.G., Diffuse optical tomography with spectral constraints and wavelength optimization. Applied Optics 44, 2082-2093 (2005). https://doi.org/10.1364/ao.44.002082 [pdf]
Yu, G., Durduran, T., Zhou, C., Wang, H.-W., Putt, M.E., Saunders, H.M., Sehgal, C.M., Glatstein, E., Yodh, A.G., and Busch, T.M., Noninvasive monitoring of murine tumor blood flow during and after photodynamic therapy provides early assessment of therapeutic efficacy. Clinical Cancer Research 11, 3543-3552 (2005). https://doi.org/10.1158/1078-0432.CCR-04-2582 [pdf]
Yu, G., Durduran, T., Lech, G., Zhou, C., Chance, B., Mohler III, E.R., and Yodh, A.G., Time-dependent blood flow and oxygenation in human skeletal muscle measured with noninvasive near-infrared diffuse optical spectroscopies. Journal of Biomedical Optics 10, 024027-1-024027-12 (2005). https://doi.org/10.1117/1.18846031 [pdf]
Bryning, M.B., Islam, M.F., Kikkawa, J.M., and Yodh, A.G., Very low conductivity threshold in bulk isotropic single-walled carbon nanotube-epoxy composites. Advanced Materials 17, 1186-1191 (2005). https://doi.org/10.1002/adma.200401649 [pdf]
Wang, H.-W., Zhu, T.C., Putt, M., Solonenko, M., Metz, J., Dimofte, A., Mile, J., Fraker, D., Glatstein, E., Hahn, S.M., and Yodh, A.G., Broadband reflectance measurements of light penetration, blood oxygenation, hemoglobin concentration, and drug concentration in human intraperitoneal tissues before and after photodynamic therapy. Journal of Biomedical Optics 10, 014004-1-014004-13 (2005). https://doi.org/10.1117/1.1854679 [pdf]
Loudet, J.C., Alsayed, A.M., Zhang, J., and Yodh, A.G., Capillary interactions between anisotropic colloidal particles. Physical Review Letters 94, 018301-1-018301-4 (2005). https://doi.org/148301-1-148301-4 [pdf]
Wang, H.-W., Putt, M.E., Emanuele, M.J., Shin, D.E., Glatstein, E., Yodh, A.G., and Busch, T.M., Treatment-induced changes in tumor oxygenation predict photodynamic therapy outcome. Cancer Research 64, 7553-7561 (2004). https://doi.org/10.1158/0008-5472.CAN-03-3632 [pdf]
Hough, L.A. , Islam, M.F., Janmey, P.A., and Yodh, A.G., Viscoelasticity of single wall carbon nanotube suspensions. Physical Review Letters 93, 168102-1168102-4 (2004). https://doi.org/10.1103/PhysRevLett.93.168102 [pdf]
Alsayed, A.M., Dogic, Z., and Yodh, A.G., Melting of lamellar phases in temperature sensitive colloid-polymer suspensions. Physical Review Letters 93, 057801-1-057801-4 (2004). https://doi.org/10.1103/PhysRevLett.93.057801 [pdf]
Durduran, T., Yu, G., Burnett, M.G., Detre, J.A., Greenberg, J.H., Wang, J., Zhou, C., and Yodh, A.G., Diffuse optical measurement of blood flow, blood oxygenation and metabolism in human brain during sensorimotor cortex activation. Optics Letters 29, 1766-1768 (2004). https://doi.org/10.1364/OL.29.001766 [pdf]
Islam, M.F., Milkie, D.E., Kane, C.L., Yodh, A.G., and Kikkawa, J.M., Direct measurement of the polarized absorption cross section of single-wall carbon nanotubes. Physical Review Letters 93, 037404-1-037404-4 (2004). https://doi.org/10.1103/PhysRevLett.93.037404 [pdf]
Bednov, A., Ulyanov, S., Cheung, C., and Yodh, A.G., Correlation properties of multiple scattered light: implication to coherent diagnostics of burned skin. Journal of Biomedical Optics 9, 347-352 (2004). https://doi.org/10.1117/1.16461711 [pdf]
Durduran, T., Burnett, M.G., Yu, G., Zhou, C., Furuya, D., Yodh, A.G., Detre, J.A., and Greenberg, J.H., Spatiotemporal quantification of cerebral blood flow during functional activation in rat somatosensory cortex using laser-speckle flowmetry. Journal of Cerebral Blood Flow and Metabolism 24, 518-525 (2004). https://doi.org/10.1097/00004647-200405000-00005 [pdf]
Dogic, Z., Zhang, J., Lau, A.W.C., Aranda-Espinoza, H., Dalhaimer, P., Discher, D.E., Janmey, P.A., Kamien, R.D., Lubensky, T.C., and Yodh, A.G., Elongation and fluctuations of semi-flexible polymers in a nematic solvent. Physical Review Letters 92, 125503-1-125503-4 (2004). https://doi.org/10.1103/PhysRevLett.92.125503 [pdf]
Islam, M.F., Alsayed, A.M., Dogic, Z., Zhang, J., Lubensky, T.C., and Yodh, A.G., Nematic nanotube gels. Physical Review Letters 92, 088303-1-088303-4 (2004). https://doi.org/10.1103/PhysRevLett.92.088303 [pdf]
Sapienza, R., Mujumdar, S., Cheung, C., Yodh, A.G., and Wiersma, D., Anisotropic weak localization of light. Physical Review Letters 92, 033903-1-033903-4 (2004). https://doi.org/10.1103/PhysRevLett.92.033903 [pdf]
Fisher, J.A.N., Civillico, E.F., Contreras, D., and Yodh, A.G., In vivo fluorescence microscopy of neuronal activity in three dimensions by use of voltage-sensitive dyes, Optics Letters 29, 71-73 (2004). https://doi.org/10.1364/OL.29.000071 [pdf]
Zhou, W., Islam, M.F., Wang, H.-W, Ho, D.L., Yodh, A.G., Winey, K.I., and Fischer, J.E., Small angle neutron scattering from single-wall carbon nanotube suspensions: evidence of isolated rigid rods and rod networks. Chemical Physics Letters 384, 185-189 (2004). https://doi.org/10.1016/j.cplett.2003.11.106 [pdf]
Wang, H.-W., Zhu, T.C., Solonenko, M., Han, S.M., Metz, J.M., Dimofte, A., Miles, J., and Yodh, A.G., In-vivo measurements of penetration depth, oxygenation, and drug concentration using broadband absorption spectroscopy in human tissues before and after photodynamic therapy. Proceedings of the SPIE – The International Society for Optical Engineering, 4952, 68-75 (2003). https://doi.org/10.1117/12.474142 [pdf]
Intes, X., Ripoll, J., Chen, Y., Nioka, S., Yodh, A.G., and Chance, B., In vivo continuous-wave optical breast imaging enhanced with Indocyanine Green. Medical Physics 30, 1039-1047 (2003). https://doi.org/10.1118/1.1573791 [pdf]
Menon, C., Polin, G.M., Prabakaran, I., Hsi, A., Cheung, C., Culver, J.P., Pingpank, J.F., Sehgal, C.S., Yodh, A.G., Buerk, D.G., and Fraker, D.L., An integrated approach to measuring tumor oxygen status using human melanoma xenografts as a model. Cancer Research 63, 7232-7240 (2003).[pdf]
Corlu, A., Durduran, T., Choe, R., Schweiger, M., Hillman, E.M.C., Arridge, S.R., and Yodh, A.G., Uniqueness and wavelength optimization in continuous-wave multi-spectral diffuse optical tomography. Optics Letters 28, 2339-2341 (2003). https://doi.org/10.1364/OL.28.002339 [pdf]
Choe, R., Durduran, T., Yu, G., Nijland, M.J.M., Chance, B., Yodh A.G., and Ramanujam, N., Transabdominal near infrared oximetry of hypoxic stress in the fetal sheep brain in utero. Proceedings of National Academy of Sciences USA 100, 12950-12954 (2003). https://doi.org/10.1073/pnas.1735462100 [pdf]
Yu, G., Durduran, T., Busch, T.M., Wang, H.-W., Zhou, C., Saunders, H.M., Sehgal, C.M., and Yodh, A.G., Non-invasive monitoring hemodynamic responses in RIF tumors during and after PDT, in Proc. SPIE, SPIE Photonics West 4952, 131-139, San Jose, CA (2003). https://doi.org/10.1117/12.474101 [pdf]
Friedberg, J.F., Skema, C., Burdick, J., Yodh, A.G., Carr, S.R., Culver, J.P., A novel technique for light delivery through branched or bent anatomic structures. Journal of Thoracic and Cardiovascular Surgery 126, 1963-1967 (2003). https://doi.org/10.1016/s0022-5223(03)01320-5 [pdf]
Culver, J.P., Furuya, D., Durduran, T., Cheung, C., Greenberg, J.H., and Yodh, A.G., Diffuse optical tomography of cerebral blood flow, oxygenation, and metabolism in rat during focal ischemia. Journal of Cerebral Blood Flow and Metabolism 23, 911-924 (2003). https://doi.org/10.1097/01.wcb.0000076703.71231.bb [pdf]
Cheung, R., Solonenko, M., Busch, T.M., Del Piero, F., Putt, M.P., Hahn, S.M., and Yodh, A.G., Correlation of in-vivo photosensitizer fluorescence and photodynamic-therapy-induced depth of necrosis in a murine tumor model, Journal of Biomedical Optics 8, 248-252 (2003). https://doi.org/10.1117/1.1560011 [pdf]
Yu, G., Durduran, T., Furuya, D., Greenberg, J., Yodh, A.G., Frequency domain multiplexing system for in vivo measurement of rapid cerebral hemodynamics, Applied Optics 42, 2931-2939 (2003). https://doi.org/10.1364/AO.42.002931 [pdf]
Chen, D.T., Weeks, E.R., Crocker, J.C., Islam, M.F., Verma, R., Gruber, J., Levine, A.J., Lubensky, T.C., and Yodh, A.G., Rheological microscopy: local properties from microrheology, Physical Review Letters 90, 108301-1-108301-4 (2003). https://doi.org/10.1103/PhysRevLett.90.108301 [pdf]
Yodh, A.G., Boas, D.A., Functional imaging with diffusing light, in Biomedical Photonics Handbook, Vo-Dinh, T., Ed., CRC Press: Boca Raton. p. 21-1-21-45, (2003).[pdf]
Culver, J.P., Choe, R., Holboke, M.J., Zubkov, L., Durduran, T., Slemp, A., Ntziachristos, V., Pattanayak, D.N., Chance, B., and Yodh, A.G., Three-dimensional diffuse optical tomography in the plane parallel transmission geometry: Evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging, Medical Physics 30, 235-247 (2003). https://doi.org/10.1118/1.1534109 [pdf]
Islam, M.F., Rojas, E., Bergey, D.M., Johnson, A.T., and Yodh, A.G., High weight fraction surfactant solubilization of single-wall carbon nanotubes in water, Nano Letters 3, 269-273 (2003). https://doi.org/10.1021/nl025924u [pdf]
Islam, M.F., Lin, K.H., Lacoste, D., Lubensky, T.C., and Yodh, A.G., Field-induced structures in miscible ferrofluid suspensions with and without latex spheres, Physical Review E 67, 021402-1-021402-8 (2003). https://doi.org/10.1103/PhysRevE.67.021402 [pdf]
Culver, J.P., Furuya, D., Durduran, T., Cheung, C, Greenberg, J.H., and Yodh, A.G., Diffuse optical measurement of hemoglobin and cerebral blood flow in rat brain during hypercapnia, hypoxia and cardiac arrest, Adv. Exp. Med. Biol. 510, 293-298 (2003).[pdf]
Zhang, J., Alsayed, A., Lin, K.H., Sanyal, S., Zhang, F., Pao, W.-J., Balagurusamy, V.S.K., Heiney, P.A., and Yodh, A.G., Template-directed convective assembly of three dimensional face-centered-cubic colloidal crystals, Applied Physics Letters 81, 3176-3178 (2002). https://doi.org/10.1063/1.1516614 [pdf]
Lau, A.W.C., Lin, K-H., and Yodh, A.G., Entropic interactions in suspensions of semi-flexible rods: short-range effects of flexibility, Physical Review E 66, 020401-1-020401-4 (2002). https://doi.org/10.1103/PhysRevE.66.020401 [pdf]
Yodh, A.G., Cheung, C., Culver, J.P., Durduran, T., Greenberg, J.H., Takahashi, K., and Furuya, D., In vivo diffuse optical spectroscopy and imaging of blood dynamics in brain, in Proceedings of the XV International Conference on Laser Spectroscopy, Snowbird, Utah, June 10-15, 2001, Chu, S., Vuletic, V., Kerman, A.J., and Chin, C., eds., World Scientific, River Edge, NJ (2002).[pdf]
Durduran, T., Choe, R., Culver, J.P., Zubkov, L., Holboke, M.J., Giammarco, J., Chance, B., and Yodh, A.G., Bulk optical properties of healthy female breast tissue, Physics in Medicine and Biology 47, 2847-2861 (2002). https://doi.org/10.1088/0031-9155/47/16/302 [pdf]
Ntziachristos, V., Yodh, A.G., Schnall, M.D., and Chance, B., MRI-guided diffuse optical spectroscopy of malignant and benign breast lesions, Neoplasia 4, 347-354 (2002). https://doi.org/10.1038/sj.neo.7900244 [pdf]
Mach, P., Wiltzius, P., Megens, M., Weitz, D.A., Lin, K.-H, Lubensky, T.C., Yodh, A.G., Switchable Bragg Diffraction from Liquid Crystal in Colloid-Templated Structures, Europhysics Letters 58, 679-685 (2002). https://doi.org/209/epl/i2002-00403-3 [pdf]
Mach, P., Wiltzius, P., Megens, M., Weitz, D.A., Lin, K.-H., Lubensky, T.C., Yodh, A.G., Electro-optic response and switchable Bragg diffraction for liquid crystal in colloid-templated materials, Physical Review E 65, 031720-1-031720-3 (2002). https://doi.org/10.1103/PhysRevE.65.031720 [pdf]
Solonenko, M., Cheung, R., Busch, T.M., Kachur, A., Griffin, G.M., Vulcan, T., Zhu, T.C., Wang, H-W., Hahn, S., and Yodh, A.G., In-vivo reflectance measurement of optical properties, blood oxygenation and motexafin lutetium uptake in canine large bowels, kidneys and prostates, Phys. Med. Biol. 47, 857-873 (2002). https://doi.org/0.1088/0031-9155/47/6/301 [pdf]
Intes, X., Ntziachristos, V., Culver, J.P., Yodh, A.G., and Chance, B., Projection access order in algebraic reconstruction technique for diffuse optical tomography, Phys. Med. Biol. 47, N1-N10 (2002). https://doi.org/10.1088/0031-9155/47/1/401 [pdf]
Yang, N., Angerer, W.E., and Yodh, A.G., Second harmonic microscopy of single micron-size particles on a substrate, Physical Review A 64, 045801-1-045801-4 (2001). https://doi.org/10.1103/PhysRevA.64.045801 [pdf]
Yang, N., Angerer, W.E., and Yodh, A.G., Angle-resolved second-harmonic light scattering from colloidal particles, Physical Review Letters 87, 103902-1-103902-4 (2001). https://doi.org/10.1103/PhysRevLett.87.103902 [pdf]
Ripoll, J., Ntziachristos, V., Culver, J.P., Yodh, A.G., and Nieto-Vesperinas, M., The Kirchhoff approximation in diffusive media with arbitrary geometry, Proceedings of the SPIE – The International Society for Optical Engineering, 4431, 134-140 (2001). [pdf]
Lin, K-H., Crocker, J.C., Zeri, A.C., and Yodh, A.G., Colloidal interactions in suspensions of rods, Physical Review Letters 87, 088301-1-088301-4 (2001). https://doi.org/10.1103/PhysRevLett.87.088301 [pdf]
Cheung, C., Culver, J.P., Takahashi, K., Greenberg, J.H., Yodh, A.G., In vivo cerebrovascular measurement combining diffuse near-infrared absorption and correlation spectroscopies, Physics in Medicine and Biology 46, 2053-2065 (2001). https://doi.org/10.1088/0031-9155/46/8/302 [pdf]
Ntziachristos, V., Hielscher, A.H., Yodh, A.G., and Chance, B., Diffuse optical tomography of highly heterogeneous media, IEEE Transactions on Medical Imaging 20, 470-478 (2001). https://doi.org/10.1109/42.929613 [pdf]
Yodh, A.G., Lin, K-H., Crocker, J.C., Dinsmore, A.D., Verma, R., and Kaplan, P.D., Entropically driven self-assembly and interaction in suspension, The Philosophical Transactions of the Royal Society of London A 359, 921-937 (2001). https://doi.org/10.1098/rsta.2000.0810 [pdf]
Culver, J.P., Ntziachristos, V., Holboke, M.J., and Yodh, A.G., Optimization of optode arrangements for diffuse optical tomography: a singular value analysis, Optics Letters 26, 701-703 (2001). https://doi.org/10.1364/OL.26.000701 [pdf]
Ripoll, J., Ntziachristos, V., Culver, J.P., Pattanayak, D.N., Yodh, A.G., and Nieto-Vesperinas, M., Recovery of optical parameters in multiple-layered diffusive media: theory and experiments, Journal of the Optical Society of America A 18, 821-830 (2001). https://doi.org/10.1364/JOSAA.18.000821 [pdf]
Intes, X., Chance, B., Holboke, M.J., and Yodh, A.G., Interfering diffusive photon-density waves with an absorbing-fluorescent inhomogeneity, Optics Express 8, 223-231 (2001). https://doi.org/10.1364/OE.8.000223 [pdf]
Griffin, G.M., Zhu, T., Solonenko, M., Del Piero, F., Kapakin, A., Busch, T., Yodh, A.G., Polin, G., Bauer, T., Fraker, D., and Hahn, S.M., Preclinical evaluation of motexafin lutetium-mediated intraperitoneal photodynamic therapy in a canine model, Clinical Cancer Research 7, 374-381 (2001).[pdf]
Owen, R.J., Crocker, J.C., Verma, R., and Yodh, A.G., Measurement of long-range steric repulsions between microspheres due to adsorbed polymer, Physical Review E 64, 011401-1-011401-6 (2001). https://doi.org/10.1103/PhysRevE.64.011401 [pdf]
2000
Holboke, M.J., Tromberg, B.J., Li, X., Shah, N., Fishkin, J., Kidney, D., Butler, J., Chance, B., and Yodh, A.G., Three-dimensional diffuse optical mammography with ultrasound localization in a human subject, Journal of Biomedical Optics 5, 237-247 (2000). https://doi.org/10.1117/1.429992 [pdf]
Yodh, A.G., and Tromberg, B.J., Celebrating Britton Chance, Journal of Biomedical Optics 5, 115-118 (2000). https://doi.org/10.1117/1.429977 [pdf]
Lin, K-H., Crocker, J.C., Prasad, V., Schofield, A., Weitz, D.A., Lubensky, T.C., and Yodh, A.G., Entropically driven colloidal crystallization on patterned surfaces, Physical Review Letters 85, 1770-1773 (2000). https://doi.org/10.1103/PhysRevLett.85.1770 [pdf]
Li, X., Pattanayak, D.N., Durduran, T., Culver, J.P., Chance, B., and Yodh, A.G., Near-field tomography with diffuse photon density waves, Physical Review E 61, 4295-4309 (2000). https://doi.org/10.1103/PhysRevE.61.4295 [pdf]
Crocker, J.C., Valentine, M.T., Weeks, E.R., Gisler, T., Kaplan, P.D., Yodh, A.G., and Weitz, D.A., Two-point microrheology of inhomogeneous soft materials, Physical Review Letters 85, 888-891 (2000). https://doi.org/10.1103/PhysRevLett.85.888 [pdf]
Vulcan, T.G., Zhu, T.C., Rodriguez, C.E., Hsi, A., Fraker, D.L., Baas, P., Murrer, L.H.P., Starr, W.M., Glatstein, E., Yodh, A.G., and Hahn, S.M., Comparison between isotropic and non-isotropic dosimetry systems during intraperitoneal photodynamic therapy, Lasers in Surgery and Medicine 26, 292-301 (2000). https://doi.org/10.1002/(SICI)1096-9101(2000)26:3<292::AID-LSM7>3.0.CO;2-T [pdf]
Verma, R., Crocker, J.C., Lubensky, T.C., and Yodh, A.G., Attractions between hard colloidal spheres in semi-flexible polymer solutions, Macromolecules 33, 177-186 (2000). https://doi.org/0.1021/ma990362v [pdf]
Ntziachristos, V., Yodh, A.G., Schnall, M., and Chance, B., Concurrent MRI and diffuse optical tomography of breast after indocyanine green enhancement, Proceedings of the National Academy of Sciences USA 97, 2767-2772 (2000). https://doi.org/10.1073/pnas.040570597 [pdf]
1999
Zimnyakov, D.A., Tuchin, V.V., Yodh, A.G., Characteristic scales of optical field depolarization and decorrelation for multiple scattering media and tissues, Journal of Biomedical Optics 4, 157-163 (1999). https://doi.org/10.1117/1.429902 [pdf]
Ntziachristos, V., Chance, B., and Yodh, A.G., Differential diffuse optical tomography, Optics Express 5, 230-242 (1999). https://doi.org/10.1364/OE.5.000230 [pdf]
Zhu, Q., Durduran, T., Ntziachristos, V., Holboke, M., and Yodh, A.G., Imager that combines near-infrared diffusive light and ultrasound, Optics Letters 24, 1050-1052 (1999). https://doi.org/10.1364/ol.24.001050 [pdf]
Pattanayak, D.N., and Yodh, A.G., Diffuse optical 3D-slice imaging of bounded turbid media using a new integro-differential equation, Optics Express 4, 231-240 (1999). https://doi.org/10.1364/OE.4.000231 [pdf]
Durduran, T., Culver, J.P., Holboke, M.J., Li, X.D., Zubkov, L., Chance, B., Pattanayak, D.N., and Yodh, A.G., Algorithms for 3D localization and imaging using near-field diffraction tomography with diffuse light, Optics Express 4, 247-262 (1999). https://doi.org/0.1364/OE.4.000247 [pdf]
Angerer, W.E., Yang, N., Yodh, A.G., Khan, M.A., and Sun, C.J., Ultrafast second-harmonic generation spectroscopy of GaN thin films on sapphire, Physical Review B 59, 2932-2946 (1999). https://doi.org/10.1103/PhysRevB.59.2932 [pdf]
Dinsmore, A.D., and Yodh, A.G., Entropic confinement of colloidal spheres in corners on silicon substrates, Langmuir 1999, 314-316 (1999). https://doi.org/10.1021/la981243w [pdf]
Ntziachristos, V., Ma, X.H., Yodh, A.G., and Chance, B., Multi-channel photon counting instrument for spatially resolved near infrared spectroscopy, Review of Scientific Instruments 70, 193-201 (1999). https://doi.org/10.1063/1.1149565 [pdf]
Crocker, J.C., Matteo, J.A., Dinsmore, A.D., and Yodh, A.G., Entropic attraction and repulsion in binary colloids probed with a line optical tweezer, Physical Review Letters 82, 4352-4355 (1999). https://doi.org/10.1103/PhysRevLett.82.4352 [pdf]
1998
Verma, R., Crocker, J.C., Lubensky, T.C., and Yodh, A.G., Entropic colloidal interactions in concentrated DNA solutions, Physical Review Letters 81, 4004-4007 (1998). https://doi.org/10.1103/PhysRevLett.81.4004 [pdf]
Li, X., Chance, B., and Yodh, A.G., Fluorescent heterogeneities in turbid media: limits for dectection, characterization, and comparison with absorption, Applied Optics 37, 6833-6844 (1998). https://doi.org/0.1364/AO.37.006833 [pdf]
Yodh, A.G., Scattered light detects cancer, Physics World 11, 28 (1998). https://doi.org/http://dx.doi.org/10.1088/2058-7058/11/5/29 [pdf]
Dinsmore, A.D., Crocker, J.C., and Yodh, A.G., Self-assembly of colloidal crystals, Current Opinion in Colloid & Interface Science 3, 5-11 (1998). https://doi.org/10.1016/S1359-0294(98)80035-6 [pdf]
Danen, R.M., Wang, Y., Li, X.D., Thayer, W.S., and Yodh, A.G., Regional imager for low-resolution functional imaging of the brain with diffusing near-infrared light, Photochemistry and Photobiology. 67, 33-40 (1998). https://doi.org/10.1111/j.1751-1097.1998.tb05162.x [pdf]
Dinsmore, A.D., Wong, D.T., Nelson, P., and Yodh, A.G., Hard spheres in vesicles: curvature-induced forces and particle-induced curvature, Physical Review Letters 80, 409-412 (1998). https://doi.org/10.1103/PhysRevLett.80.409 [pdf]
1997
Durduran, T., Yodh, A.G., Chance, B., and Boas, D.A., Does the photon-diffusion coefficient depend on absorption? Journal of the Optical Society of America A 14, 3358-3364 (1997). https://doi.org/10.1364/JOSAA.14.003358 [pdf]
Dinsmore, A.D., Warren, P.B., Poon, W.C.K., and Yodh, A.G., Fluid-solid transitions on walls in binary hard-sphere mixtures, Europhysics Letters 40, 337-342 (1997). https://doi.org/10.1209/epl/i1997-00468-4 [pdf]
Li, X.D., Durduran, T., Yodh, A.G., Chance, B., and Pattanayak, D.N., Diffraction tomography for biochemical imaging with diffuse-photon density waves, Optics Letters 22, 573-575 (1997). https://doi.org/10.1364/OL.22.000573 [pdf]
Boas, D.A., and Yodh, A.G., Spatially varying dynamical properties of turbid media probed with diffusing temporal light correlation, Journal of the Optical Society of America A 14, 192-215 (1997). https://doi.org/10.1364/JOSAA.14.000192 [pdf]
Stark, H., Kao, M.H., Jester, K.A., Lubensky, T.C., Yodh, A.G., and Collings, P.J., Light diffusion and diffusing-wave spectroscopy in nematic liquid crystals, Journal of the Optical Society of America A 14, 156-178 (1997). https://doi.org/10.1364/JOSAA.14.000156. [pdf]
Boas, D.A., O’Leary, M.A., Chance, B., Yodh, A.G., Detection and characterization of optical inhomogeneities with diffuse photon density waves: a signal-to-noise analysis, Applied Optics 36, 75-92 (1997).[pdf]
1996
Culver, J.P., Li, M., Hochstrasser, R.M., and Yodh, A.G., Vibrational dynamics of low frequency (<100 cm-1) adsorbate motions, Surface Science 368, 9-19 (1996). https://doi.org/10.1016/s0039-6028(96)01023-0 [pdf]
Kao, M.H., Jester, K.A., Yodh, A.G., and Collings, P.J., Observation of light diffusion and correlation transport in nematic liquid crystals, Physical Review Letters 77, 2233-2236 (1996).[pdf]
Dinsmore, A.D., Yodh, A.G., and Pine, D.J., Entropic control of particle motion using passive surface microstructures, Nature 383, 239-242 (1996). https://doi.org/10.1038/383239a0 [pdf]
Qi, J., Angerer, W., Yeganeh, M.S., Yodh, A.G., Theis, W.M., Midgap states observed by nonlinear optical spectroscopy of metal: GaAs junctions, Applied Surface Science 104/105, 188-195 (1996). https://doi.org/10.1016/S0169-4332(96)00143-2 [pdf]
Li, X.D., O’Leary, M.A., Boas, D.A., Chance, B. and Yodh, A.G., Fluorescent diffuse photon density waves in homogeneous and heterogeneous turbid media: analytic solutions and applications, Applied Optics 35, 3746-3758 (1996). https://doi.org/10.1364/ao.35.003746 [pdf]
Culver, J.P., Li, M., Sun, Z.-J., Hochstrasser, R.M., and Yodh, A.G., Temperature-dependent coupling of low frequency adsorbate vibrations to metal substrate electrons. Chemical Physics 205, 159-166 (1996). https://doi.org/10.1016/0301-0104(95)00376-2 [pdf]
Boas, D.A., Meglinsky, I.V., Zemany, L., Campbell, L.E., Chance, B., and Yodh, A.G., Diffusion of temporal field correlation with selected applications, In Tuchin, V., ed, SPIE Coherence-Domain Methods in Biomedical Optics, 2732, 34-36 (1996).[pdf]
Yodh, A.G., Laser experiments for beginners, Book Review, Physics Today 49, 91-92 (1996).[pdf]
O’Leary, M.A., Boas, D.A., Li, X.D, Chance, B., and Yodh, A.G., Fluorescence lifetime imaging in turbid media, Optics Letters 21, 158-160 (1996). https://doi.org/10.1364/ol.21.000158 [pdf]
1995
Qi, J., Angerer, W., Yeganeh, M.S., Yodh, A.G., and Theis, W.M., Observation of midgap interface states in buried metal/GaAs junctions, Physical Review Letters 75, 3174-3177 (1995). https://doi.org/10.1103/PhysRevLett.75.3174 [pdf]
Boas, D.A., Campbell, L.E., and Yodh, A.G., Scattering and imaging with diffusing temporal field correlations, Physical Review Letters 75, 1855-1858 (1995). https://doi.org/10.1103/PhysRevLett.75.1855 [pdf]
Liu, H., Boas, D.A., Zhang, Y., Yodh, A.G., and Chance, B., Determination of optical properties and blood oxygenation in tissue using continuous NIR light, Phys. Med. Biol 40, 1983-1993 (1995). https://doi.org/10.1088/0031-9155/40/11/015 [pdf]
Yodh, A., and Chance, B., Spectroscopy and imaging with diffusing light, Physics Today 48, 34-40 (1995); reprinted in Japanese by The Maruzen Co., in the Japanese Physics journal “Parity” pp. 8-17 (Feb. 1996); reprinted in Advances in Spectroscopy and Lasers, Bist, H.D., Little, T.S., eds., Tata McGraw-Hill, New Delhi, chapter 6, pp. 119-131 (1997). https://doi.org/10.1063/1.881445 [pdf]
Dinsmore, A.D., Yodh, A.G., and Pine, D.J., Phase-diagrams of nearly hard-sphere binary colloids, Physical Review E 52, 4045-4057 (1995). https://doi.org/10.1103/PhysRevE.52.4045 [pdf]
Gonatas, C.P., Leigh, J.S., Yodh, A.G., Glazier, J.A., and Prause, B., Magnetic resonance images of coarsening inside a foam, Physical Review Letters 75, 573-576 (1995). https://doi.org/10.1103/PhysRevLett.75.573 [pdf]
O’Leary, M.A., Boas, D.A., Chance, B., and Yodh, A.G., Experimental images of heterogeneous turbid media by frequency-domain diffusing-photon tomography, Optics Letters 20, 426-428 (1995). https://doi.org/10.1364/ol.20.000426 [pdf]
Qi, J., Angerer, M.S., Yeganeh, M.S., Yodh, A.G., and Theis, W.M., Transverse diffusion of minority carriers confined near the GaAs surface plane, Physical Review B 51, 13533-13537 (1995). https://doi.org/10.1103/PhysRevB.51.13533 [pdf]
Culver, J.P., Li, M., Jahn, L.G., Hochstrasser, R.M., and Yodh, A.G., Femtosecond photoprocesses: adsorbate infrared spectral response following visible pulse metal substrate excitation, in Laser Spectroscopy and Photochemistry on Metal Surfaces, Ho, W., and Dai, H-L., eds, World Scientific Publishing Co., Singapore, 542-589 (1995).[pdf]
1994
Pine, D.J., Weitz, D.A., Zhu, J.X., Durian, D.J., Yodh, A.G., and Kao, M., Diffusing-wave spectroscopy and interferometry, Macromolecular Symposia 79, 31-44 (1994). https://doi.org/10.1002/masy.19940790105 [pdf]
Talaat, H., Elissa, L., Negm, S., Burstein, E., Yeganeh, M.S., and Yodh, A.G., Light scattering studies of ZnSe/GaAs heterostructures, J. Vac. Sci. Technol. B 12, 2598-2604 (1994). https://doi.org/10.1116/1.587216 [pdf]
Yodh, A.G., Culver, J.P., Li, M., Jahn, L.G. and Hochstrasser, R.M., Adsorbate infrared response following femtosecond metal-substrate heating, in Ultrafast Phenomena IX, Harris, C.B., Ippen, E.P., Mourou, G.A., Zewail, A.H. eds, 169-171, Springer Verlag, (1994).[pdf]
Kaplan, P.D., Dinsmore, A.D., Yodh, A.G., and Pine, D.J., Diffuse-transmission spectroscopy: a structural probe of opaque colloidal mixtures, Physical Review E 50, 4827-4835 (1994). https://doi.org/10.1103/PhysRevE.50.4827 [pdf]
Yeganeh, M.S., Qi, J., Culver, J.P., and Yodh, A.G., Three-wave-mixing spectroscopy of ZnSe/GaAs (001) heterointerfaces, Physical Review B 49, 11196-11209 (1994). https://doi.org/10.1103/PhysRevB.49.11196 [pdf]
Boas, D.A., O’Leary, M.A., Chance, B., Yodh, A.G., Scattering of diffuse photon density waves by spherical inhomogeneities within turbid media: analytic solution and applications, Proceedings of the National Academy of Sciences USA 91, 4887-4891 (1994). https://doi.org/10.1073/pnas.91.11.4887 [pdf]
O’Leary, M.A., Boas, D.A., Chance, B., and Yodh, A.G., Re-radiation and imaging of diffuse photon density waves using fluorescent inhomogeneities, Journal of Luminescence 60&61, 281-286 (1994). https://doi.org/10.1016/0022-2313(94)90147-3 [pdf]
Kaplan, P.D., Rouke, J.L., Yodh, A.G., and Pine, D.J., Entropically driven surface phase separation in binary colloidal mixtures, Physical Review Letters 72, 582-585 (1994). https://doi.org/10.1103/PhysRevLett.72.582 [pdf]
1993
Culver, J.P., Li, M., Jahn, L.G., Hochstrasser, and Yodh, A.G., Vibrational response of surface adsorbates to femtosecond substrate heating, Chemical Physics Letters 214, 431-437 (1993). https://doi.org/10.1016/0009-2614(93)85661-7 [pdf]
Owrutsky, J.C., Li, M., Culver, J.P., Sarisky, M.J., Yodh, A.G., and Hochstrasser, R.H., Vibrational dynamics of condensed phase models studied by ultrafast infrared spectroscopy, in Time Resolved Vibrational Spectroscopy VI, Lau, A., Siebert, F., Werncke, W., eds., Springer Proc. Phys. (Springer, Heidelberg-Berlin, 1993). [pdf]
Qi, J., Yeganeh, M.S., Koltover, I., Yodh, A.G., and Theis, W.M., Depletion-electric-field-induced changes in second-harmonic generation from GaAs, Physical Review Letters 71, 633-636 (1993). https://doi.org/10.1103/PhysRevLett.71.633 [pdf]
Kaplan, P.D, Kao, M.S., Yodh, A.G., and Pine, D.J., Geometric constraints for the design of diffusing-wave spectroscopy experiments, Applied Optics 32, 3828-3836, (1993). https://doi.org/10.1364/AO.32.003828 [pdf]
Yeganeh, M.S., Qi, J., Yodh, A.G., and Tamargo, M.C., Interfacial electronic trap lifetimes studied by the photomodulation of second-harmonic generation processes, Journal of the Optical Society of America B 10, 2093-2099 (1993). https://doi.org/10.1364/josab.10.002093 [pdf]
Boas, D.A., O’Leary, M.A., Chance, B., and Yodh, A.G., Scattering and wavelength transduction of diffuse photon density waves, Physical Review E, Rapid Communications 47, R2999-R3002 (1993). https://doi.org/10.1103/PhysRevE.47.R2999 [pdf]
Li, M., Owrutsky, J., Sarisky, M., Culver, J.P., Yodh, A., and Hochstrasser, R.M., Vibrational and rotational relaxation times of solvated molecular ions, Journal of Chemistry & Physics 98, 5499-5507 (1993). https://doi.org/10.1063/1.464899 [pdf]
Kao, M.H. Yodh, A.G., and Pine, D.L., Observation of Brownian motion on the time scale of hydrodynamic interactions, Physical Review Letters 70, 242-245 (1993). https://doi.org/10.1103/PhysRevLett.70.242 [pdf]
Kaplan, P.D., Yodh, A.G., and Townsend, D.F., Noninvasive study of gel formation in polymer-stabilized dense colloids using multiply scattered light, Journal of Colloid and Interface Science 155, 319-324 (1993). https://doi.org/10.1006/jcis.1993.1041 [pdf]
Yodh, A.G., Owrutsky, J.C., Culver, J.P., Li, M., Kim, Y.R., Sarisky, M.J., Yeganeh, M.S., and Hochstrasser, R.M., Femtosecond coherent transient vibrational spectroscopy of CO adsorbed on Cu (111), in Ultrafast Phenomena VIII, June 8-12, 1992, Antibes, France, Springer-Verlag, 345-346 (1993).[pdf]
1992
Yeganeh, M.S., Qi, J., Yodh, A.G., and Tamargo, M.C., Influence of heterointerface atomic structure and defects on second-harmonic generation, Physical Review Letters 69, 3579-3582 (1992). https://doi.org/10.1103/PhysRevLett.69.3579 [pdf]
O’Leary, M.A., Boas, D.A., Chance, B., and Yodh, A.G., Refraction of diffuse photon density waves, Physical Review Letters 69, 2658-2661 (1992). https://doi.org/10.1103/PhysRevLett.69.2658 [pdf]
Owrutsky, J.C., Culver, J.P., Li, M., Kim, R., Sarisky, M.J., Yegeneh, M.S., Yodh, A.G., Hochstrasser, R.M., Femtosecond coherent transient infrared spectroscopy of CO on Cu (111), Journal of Chemistry and Physics 97, 4421-4427 (1992). https://doi.org/10.1063/1.463884 [pdf]
Yeganeh, M.S., Qi, J., Culver, J.P. and Yodh, A.G., Tamargo, M.C., Interference in reflected second-harmonic generation from thin nonlinear films, Physical Review B 46, 1603-1610 (1992).
https://doi.org/10.1103/PhysRevB.46.1603
[pdf]
Yodh, A.G., Pine, D.J., Kaplan, P.D., Kao, M.H., and Georgiades, N., Speckle fluctuations and their use as probes of dense random media, Mol. Cryst. Liq. Cryst. Sci. Technol. Sec. B 3, 149-160 (1992). [pdf]
Yodh, A.G., and Tom, H.W.K., Picosecond linear vibrational spectroscopy of CO adsorbed on Cu (111) by phase-sensitive polarization modulation, Physical Review B 45, 14302-14307 (1992). https://doi.org/10.1103/PhysRevB.45.14302 [pdf]
Yeganeh, M.S., Qi, J., Yodh, A.G., Tamargo, M.C., Interface quantum well states observed by three-wave mixing in ZnSe/GaAs heterostructures, Physical Review Letters 68, 3761-3764 (1992). https://doi.org/10.1103/PhysRevLett.68.3761 [pdf]
Kaplan, P.D., Yodh, A.G., Pine, D.J., Diffusion and structure in dense binary suspensions, Physical Review Letters 68, 393-396 (1992). https://doi.org/10.1103/PhysRevLett.68.393 [pdf]
1991
Yeganeh, M.S., Yodh, A.G., and Tamargo, M.C., Nonlinear spectroscopy of thin epitaxial ZnSe films on GaAs[100], in Proceedings for 180th Meeting of The Electrochemical Society, Nonlinear Optics and Materials Session, Phoenix, Arizona, October 13-17, 1991. Journal of the Electrochemical Society 138, 416C (1991). https://doi.org/10.1103/PhysRevLett.69.3579 [pdf]
Yodh, A.G., Kaplan, P.D., and Pine, D.J., Pulsed diffusing-wave spectroscopy in dense colloids, in Laser Optics of Condensed Matter, vol. 2 of The Physics of Optical Phenomena and Their Use as Probes of Matter, Garmire, E., Maradudin, A., and Rebane, K., eds., Plenum Press, 307-314 (1991).[pdf]
Yodh, A.G., Georgiades, N., and Pine, D.J., Diffusing-wave interferometry, Optics Communications 83, 56-59 (1991). https://doi.org/10.1016/0030-4018(91)90521-e [pdf]
Yodh, A.G., Tom, H.W.K., Aumiller, G.D., and Miranda, R.S., Generation of tunable mid-infrared picosecond pulses at 76 MHz, Journal of the Optical Society of America B 8, 1663-1667 (1991). https://doi.org/10.1364/josab.8.001663 [pdf]
1990
Yodh, A.G., Kaplan, P.D., and Pine, D.J., Pulsed diffusing-wave spectroscopy: pathlength specific observation of speckle fluctuation spectra from dense colloids, in Ultrafast Phenomena VII, Harris, C., and Ippen, E., eds., Springer-Verlag, 169-171 (1990). [pdf]
Yodh, A.G., Kaplan, P.D., and Pine, D.J., Pulsed diffusing-wave spectroscopy: high resolution through nonlinear optical gating, Physical Review B 42, 4744-4747 (1990). https://doi.org/10.1103/PhysRevB.42.4744 [pdf]
before 1990
Chu, S., Mills, A.P. Jr., Yodh, A.G., Nagamine, K., Miyake, Y., Kuga, T., Laser excitation of the muonium 1S-2S transition, Physical Review Letters 60, 101-104 (1988). https://doi.org/10.1103/PhysRevLett.60.101 [pdf]
Chu, S., Mills, A.P., Yodh, A.G., Nagamine, K., Miyake, H., and Kuga, T., Excitation of the 1S-2S transition in muonium, in Laser Spectroscopy VIII, Persson, W., and Svanberg, S., eds., Springer-Verlag, 28-29 (1987).[pdf]
Yodh, A.G., Mossberg, T.W., and Thomas, J.E., Orientation and alignment velocity-change spectra obtained by direct inversion of time domain stimulated echo data, in Spectral Line Shapes VII, Exton, R.J., ed., Walter de Gruyter Publishers, 579-780 (1986).[pdf]
Yodh, A.G., Mossberg, T.W., Thomas, J.E., Multipole-specific, model-independent, velocity-change spectra of collisionally perturbed 3P1-state 174Yb atoms, Physical Review A 34, 5150-5153 (1986). https://doi.org/10.1103/PhysRevA.34.5150 [pdf]
Bai, Y.S., Yodh, A.G., and Mossberg, T.W., Time reversal of optical nutation signals, Physical Review A 34, 1222-1227 (1986). https://doi.org/10.1103/PhysRevA.34.1222 [pdf]
Bai, Y.S., Babbitt, W.R., Yodh, A.G., and Mossberg, T.W., Interaction of transient temporally modulated laser radiation with simple atomic systems, in Advances in Laser Science I, Stwalley, W., Lapp, M., eds., American Institute of Physics, 421-424 (1986).[pdf]
Lu, N., Berman, P., Yodh, A.G., Bai, Y.S., and Mossberg, T.W., Transient probe spectra in strongly driven atoms and their dependence on initial atomic conditions, Physical Review A 33, 3956-3969 (1986). https://doi.org/http://dx.doi.org/10.1103/PhysRevA.33.3956 [pdf]
Bai, Y.S., Yodh, A.G., and Mossberg, T.W., Resonance fluorescence during phase-controlled transient excitation, Physics Letters 111A, 291-293 (1985). https://doi.org/10.1016/0375-9601(85)90630-9 [pdf]
Bai, Y.S., Yodh, A.G., and Mossberg, T.W., Selective excitation of dressed atomic states using phase-controlled optical fields, Physical Review Letters 55, 1277-1280 (1985). https://doi.org/10.1103/PhysRevLett.55.1277 [pdf]
Yodh, A.G., Golub, J., and Mossberg, T.W. Collisional relaxation of excited-state Zeeman coherences in atomic ytterbium vapor, Physical Review A 32, 844-853 (1985). https://doi.org/10.1103/PhysRevA.32.844 [pdf]
Bai, Y.S., Yodh, A.G., and Mossberg, T.W., Studies of two-level atoms identically prepared by phase- and amplitude-controlled excitation field, in Laser Spectroscopy VII, Hänsch, T.W., and Shen, Y.R., eds., Springer-Verlag, 283-284 (1985).[pdf]
Yodh, A.G., Golub, J., and Mossberg, T.W., Colliding without relaxing: The suppression of collisional dephasing with strong optical, in Laser Spectroscopy VII, Hänsch, T.W., and Shen, Y.R., eds., Springer-Verlag, 296-297 (1985).[pdf]
Carlson, N.W., Yodh, A.G., and Mossberg, T.W., Standing-wave induced backward photon echoes in gases, in Coherence and Quantum Optics V, Mandel, L., and Wolf, E., eds., Plenum Press, 309-315 (1984).[pdf]
Yodh, A.G., Golub, J., Carlson, N.W., and Mossberg, T.W., Optically inhibited collisional dephasing, Physical Review Letters 53, 659-662 (1984). https://doi.org/10.1103/PhysRevLett.53.659 [pdf]
Yodh, A.G., Bai, Y., Golub, J.E., and Mossberg, T.W., Grazing-incidence dye lasers with and without intracavity lenses: a comparative study, Applied Optics 23, 2040-2042 (1984). https://doi.org/10.1364/AO.23.002040 [pdf]
Carlson, N.W., Rothberg, L.J., Yodh, A.G., Babbitt, W.R., and Mossberg, T.W., Storage and time reversal of light pulses using photon echoes, Optics Letters 8, 483-485 (1983). https://doi.org/10.1364/OL.8.000483 [pdf]
Carlson, N.W., Yodh, A.G., and Mossberg, T.W., Standing-wave-induced backward photon echoes in gases, Physical Review Letters 51, 35-38 (1983). https://doi.org/10.1103/PhysRevLett.51.35 [pdf]